Examples with Narrative org.hl7.fhir.r5.model.Narrative used on opensource projects

Example 91 with Narrative

use of org.hl7.fhir.r5.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class ProfileDrivenRenderer method renderLeaf.

private void renderLeaf(ResourceWrapper res, BaseWrapper ew, ElementDefinition defn, XhtmlNode parent, XhtmlNode x, boolean title, boolean showCodeDetails, Map<String, String> displayHints, String path, int indent) throws FHIRException, UnsupportedEncodingException, IOException, EOperationOutcome {
    if (ew == null)
        return;
    Base e = ew.getBase();
    if (e instanceof StringType)
        x.addText(((StringType) e).getValue());
    else if (e instanceof CodeType)
        x.addText(((CodeType) e).getValue());
    else if (e instanceof IdType)
        x.addText(((IdType) e).getValue());
    else if (e instanceof Extension)
        return;
    else if (e instanceof InstantType)
        x.addText(((InstantType) e).toHumanDisplay());
    else if (e instanceof DateTimeType) {
        renderDateTime(x, e);
    } else if (e instanceof Base64BinaryType)
        x.addText(new Base64().encodeAsString(((Base64BinaryType) e).getValue()));
    else if (e instanceof org.hl7.fhir.r5.model.DateType) {
        org.hl7.fhir.r5.model.DateType dt = ((org.hl7.fhir.r5.model.DateType) e);
        renderDate(x, dt);
    } else if (e instanceof Enumeration) {
        Object ev = ((Enumeration<?>) e).getValue();
        // todo: look up a display name if there is one
        x.addText(ev == null ? "" : ev.toString());
    } else if (e instanceof BooleanType) {
        x.addText(((BooleanType) e).getValue().toString());
    } else if (e instanceof CodeableConcept) {
        renderCodeableConcept(x, (CodeableConcept) e, showCodeDetails);
    } else if (e instanceof Coding) {
        renderCoding(x, (Coding) e, showCodeDetails);
    } else if (e instanceof CodeableReference) {
        renderCodeableReference(x, (CodeableReference) e, showCodeDetails);
    } else if (e instanceof Annotation) {
        renderAnnotation(x, (Annotation) e);
    } else if (e instanceof Identifier) {
        renderIdentifier(x, (Identifier) e);
    } else if (e instanceof org.hl7.fhir.r5.model.IntegerType) {
        if (((org.hl7.fhir.r5.model.IntegerType) e).hasValue()) {
            x.addText(Integer.toString(((org.hl7.fhir.r5.model.IntegerType) e).getValue()));
        } else {
            x.addText("??");
        }
    } else if (e instanceof org.hl7.fhir.r5.model.Integer64Type) {
        if (((org.hl7.fhir.r5.model.Integer64Type) e).hasValue()) {
            x.addText(Long.toString(((org.hl7.fhir.r5.model.Integer64Type) e).getValue()));
        } else {
            x.addText("??");
        }
    } else if (e instanceof org.hl7.fhir.r5.model.DecimalType) {
        x.addText(((org.hl7.fhir.r5.model.DecimalType) e).getValue().toString());
    } else if (e instanceof HumanName) {
        renderHumanName(x, (HumanName) e);
    } else if (e instanceof SampledData) {
        renderSampledData(x, (SampledData) e);
    } else if (e instanceof Address) {
        renderAddress(x, (Address) e);
    } else if (e instanceof ContactPoint) {
        renderContactPoint(x, (ContactPoint) e);
    } else if (e instanceof Expression) {
        renderExpression(x, (Expression) e);
    } else if (e instanceof Money) {
        renderMoney(x, (Money) e);
    } else if (e instanceof ContactDetail) {
        ContactDetail cd = (ContactDetail) e;
        if (cd.hasName()) {
            x.tx(cd.getName() + ": ");
        }
        boolean first = true;
        for (ContactPoint c : cd.getTelecom()) {
            if (first)
                first = false;
            else
                x.tx(",");
            renderContactPoint(x, c);
        }
    } else if (e instanceof UriType) {
        renderUri(x, (UriType) e, defn.getPath(), rcontext != null && rcontext.getResourceResource() != null ? rcontext.getResourceResource().getId() : null);
    } else if (e instanceof Timing) {
        renderTiming(x, (Timing) e);
    } else if (e instanceof Range) {
        renderRange(x, (Range) e);
    } else if (e instanceof Quantity) {
        renderQuantity(x, (Quantity) e, showCodeDetails);
    } else if (e instanceof Ratio) {
        renderQuantity(x, ((Ratio) e).getNumerator(), showCodeDetails);
        x.tx("/");
        renderQuantity(x, ((Ratio) e).getDenominator(), showCodeDetails);
    } else if (e instanceof Period) {
        Period p = (Period) e;
        renderPeriod(x, p);
    } else if (e instanceof Reference) {
        Reference r = (Reference) e;
        if (r.getReference() != null && r.getReference().contains("#")) {
            if (containedIds.contains(r.getReference().substring(1))) {
                x.ah(r.getReference()).tx("See " + r.getReference());
            } else {
                // in this case, we render the resource in line
                ResourceWrapper rw = null;
                for (ResourceWrapper t : res.getContained()) {
                    if (r.getReference().substring(1).equals(t.getId())) {
                        rw = t;
                    }
                }
                if (rw == null) {
                    renderReference(res, x, r);
                } else {
                    x.an(rw.getId());
                    ResourceRenderer rr = RendererFactory.factory(rw, context.copy().setAddGeneratedNarrativeHeader(false));
                    rr.render(parent.blockquote(), rw);
                }
            }
        } else {
            renderReference(res, x, r);
        }
    } else if (e instanceof Resource) {
        return;
    } else if (e instanceof DataRequirement) {
        DataRequirement p = (DataRequirement) e;
        renderDataRequirement(x, p);
    } else if (e instanceof PrimitiveType) {
        x.tx(((PrimitiveType) e).primitiveValue());
    } else if (e instanceof ElementDefinition) {
        x.tx("todo-bundle");
    } else if (e != null && !(e instanceof Attachment) && !(e instanceof Narrative) && !(e instanceof Meta)) {
        throw new NotImplementedException("type " + e.getClass().getName() + " not handled - should not be here");
    }
}

Example 92 with Narrative

use of org.hl7.fhir.r5.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class DataRenderer method addMarkdown.

// -- 2. Markdown support -------------------------------------------------------
protected void addMarkdown(XhtmlNode x, String text) throws FHIRFormatError, IOException, DefinitionException {
    if (text != null) {
        // 1. custom FHIR extensions
        while (text.contains("[[[")) {
            String left = text.substring(0, text.indexOf("[[["));
            String link = text.substring(text.indexOf("[[[") + 3, text.indexOf("]]]"));
            String right = text.substring(text.indexOf("]]]") + 3);
            String url = link;
            String[] parts = link.split("\\#");
            StructureDefinition p = getContext().getWorker().fetchResource(StructureDefinition.class, parts[0]);
            if (p == null)
                p = getContext().getWorker().fetchTypeDefinition(parts[0]);
            if (p == null)
                p = getContext().getWorker().fetchResource(StructureDefinition.class, link);
            if (p != null) {
                url = p.getUserString("path");
                if (url == null)
                    url = p.getUserString("filename");
            } else
                throw new DefinitionException("Unable to resolve markdown link " + link);
            text = left + "[" + link + "](" + url + ")" + right;
        }
        // 2. markdown
        String s = getContext().getMarkdown().process(Utilities.escapeXml(text), "narrative generator");
        XhtmlParser p = new XhtmlParser();
        XhtmlNode m;
        try {
            m = p.parse("<div>" + s + "</div>", "div");
        } catch (org.hl7.fhir.exceptions.FHIRFormatError e) {
            throw new FHIRFormatError(e.getMessage(), e);
        }
        x.getChildNodes().addAll(m.getChildNodes());
    }
}

Example 93 with Narrative

use of org.hl7.fhir.r5.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class ResourceRenderer method render.

/**
 * given a resource, update it's narrative with the best rendering available
 *
 * @param r - the domain resource in question
 *
 * @throws IOException
 * @throws EOperationOutcome
 * @throws FHIRException
 */
public void render(DomainResource r) throws IOException, FHIRException, EOperationOutcome {
    XhtmlNode x = new XhtmlNode(NodeType.Element, "div");
    boolean ofr = forResource;
    boolean hasExtensions;
    try {
        forResource = true;
        hasExtensions = render(x, r);
    } finally {
        forResource = ofr;
    }
    inject(r, x, hasExtensions ? NarrativeStatus.EXTENSIONS : NarrativeStatus.GENERATED);
}

Example 94 with Narrative

use of org.hl7.fhir.r5.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class ResourceRenderer method renderReference.

public void renderReference(ResourceWrapper rw, XhtmlNode x, Reference r, boolean allowLinks) throws UnsupportedEncodingException, IOException {
    if (r == null) {
        x.tx("null!");
        return;
    }
    XhtmlNode c = null;
    ResourceWithReference tr = null;
    if (r.hasReferenceElement() && allowLinks) {
        tr = resolveReference(rw, r.getReference());
        if (!r.getReference().startsWith("#")) {
            if (tr != null && tr.getReference() != null)
                c = x.ah(tr.getReference());
            else
                c = x.ah(r.getReference());
        } else {
            c = x.ah(r.getReference());
        }
    } else {
        c = x.span(null, null);
    }
    if (tr != null && tr.getReference() != null && tr.getReference().startsWith("#")) {
        c.tx("See above (");
    }
    // what to display: if text is provided, then that. if the reference was resolved, then show the name, or the generated narrative
    String display = r.hasDisplayElement() ? r.getDisplay() : null;
    String name = tr != null && tr.getResource() != null ? tr.getResource().getNameFromResource() : null;
    if (display == null && (tr == null || tr.getResource() == null)) {
        c.addText(r.getReference());
    } else if (context.isTechnicalMode()) {
        c.addText(r.getReference());
        if (display != null) {
            c.addText(": " + display);
        }
        if ((tr == null || !tr.getReference().startsWith("#")) && name != null) {
            x.addText(" \"" + name + "\"");
        }
        if (r.hasExtension(ToolingExtensions.EXT_TARGET_ID)) {
            x.addText("(#" + r.getExtensionString(ToolingExtensions.EXT_TARGET_ID) + ")");
        } else if (r.hasExtension(ToolingExtensions.EXT_TARGET_PATH)) {
            x.addText("(#/" + r.getExtensionString(ToolingExtensions.EXT_TARGET_PATH) + ")");
        }
    } else {
        if (display != null) {
            c.addText(display);
        } else if (name != null) {
            c.addText(name);
        } else {
            c.tx(". Generated Summary: ");
            if (tr != null) {
                new ProfileDrivenRenderer(context).generateResourceSummary(c, tr.getResource(), true, r.getReference().startsWith("#"), true);
            }
        }
    }
    if (tr != null && tr.getReference() != null && tr.getReference().startsWith("#")) {
        c.tx(")");
    }
}

Example 95 with Narrative

use of org.hl7.fhir.r5.model.Narrative in project org.hl7.fhir.core by hapifhir.

the class LiquidRenderer method render.

@Override
public boolean render(XhtmlNode x, Resource r) throws FHIRFormatError, DefinitionException, IOException, FHIRException, EOperationOutcome {
    LiquidEngine engine = new LiquidEngine(context.getWorker(), context.getServices());
    XhtmlNode xn;
    try {
        engine.setIncludeResolver(new LiquidRendererIncludeResolver(context));
        LiquidDocument doc = engine.parse(liquidTemplate, "template");
        String html = engine.evaluate(doc, r, rcontext);
        xn = new XhtmlParser().parseFragment(html);
        if (!x.getName().equals("div"))
            throw new FHIRException("Error in template: Root element is not 'div'");
    } catch (FHIRException | IOException e) {
        xn = new XhtmlNode(NodeType.Element, "div");
        xn.para().b().style("color: maroon").tx("Exception generating Narrative: " + e.getMessage());
    }
    x.getChildNodes().addAll(xn.getChildNodes());
    return true;
}