Examples with PackageInfo org.hl7.fhir.utilities.npm.PackageInfo used on opensource projects

Example 1 with PackageInfo

use of org.hl7.fhir.utilities.npm.PackageInfo in project kindling by HL7.

the class ValueSetGenerator method genAbstractTypes.

private void genAbstractTypes(ValueSet vs) {
    if (!vs.hasCompose())
        vs.setCompose(new ValueSetComposeComponent());
    vs.getCompose().addInclude().setSystem("http://hl7.org/fhir/abstract-types");
    vs.setUserData("filename", "valueset-" + vs.getId());
    if (!vs.hasExtension(ToolingExtensions.EXT_WORKGROUP)) {
        vs.addExtension().setUrl(ToolingExtensions.EXT_WORKGROUP).setValue(new CodeType("fhir"));
    } else {
        String ec = ToolingExtensions.readStringExtension(vs, ToolingExtensions.EXT_WORKGROUP);
        if (!ec.equals("fhir"))
            System.out.println("ValueSet " + vs.getUrl() + " WG mismatch 8: is " + ec + ", want to set to " + "fhir");
    }
    vs.setUserData("path", "valueset-" + vs.getId() + ".html");
    CodeSystem cs = new CodeSystem();
    cs.setUserData("filename", vs.getUserString("filename").replace("valueset-", "codesystem-"));
    cs.setUserData("path", vs.getUserString("path").replace("valueset-", "codesystem-"));
    CodeSystemConvertor.populate(cs, vs);
    cs.setUrl("http://hl7.org/fhir/abstract-types");
    cs.setVersion(version);
    cs.setCaseSensitive(true);
    cs.setContent(CodeSystemContentMode.COMPLETE);
    definitions.getCodeSystems().see(cs, packageInfo);
    cs.addConcept().setCode("Type").setDisplay("Type").setDefinition("A place holder that means any kind of data type");
    cs.addConcept().setCode("Any").setDisplay("Any").setDefinition("A place holder that means any kind of resource");
    markSpecialStatus(vs, cs, true);
}

Example 2 with PackageInfo

use of org.hl7.fhir.utilities.npm.PackageInfo in project kindling by HL7.

the class ValueSetGenerator method genResourceTypes.

private void genResourceTypes(ValueSet vs) {
    if (!vs.hasCompose())
        vs.setCompose(new ValueSetComposeComponent());
    vs.getCompose().addInclude().setSystem("http://hl7.org/fhir/resource-types");
    vs.setUserData("filename", "valueset-" + vs.getId());
    if (!vs.hasExtension(ToolingExtensions.EXT_WORKGROUP)) {
        vs.addExtension().setUrl(ToolingExtensions.EXT_WORKGROUP).setValue(new CodeType("fhir"));
    } else {
        String ec = ToolingExtensions.readStringExtension(vs, ToolingExtensions.EXT_WORKGROUP);
        if (!ec.equals("fhir"))
            System.out.println("ValueSet " + vs.getUrl() + " WG mismatch 7: is " + ec + ", want to set to " + "fhir");
    }
    vs.setUserData("path", "valueset-" + vs.getId() + ".html");
    CodeSystem cs = new CodeSystem();
    CodeSystemConvertor.populate(cs, vs);
    cs.setUrl("http://hl7.org/fhir/resource-types");
    cs.setVersion(version);
    cs.setCaseSensitive(true);
    cs.setContent(CodeSystemContentMode.COMPLETE);
    definitions.getCodeSystems().see(cs, packageInfo);
    List<String> codes = new ArrayList<String>();
    codes.addAll(definitions.getBaseResources().keySet());
    codes.addAll(definitions.getKnownResources().keySet());
    Collections.sort(codes);
    for (String s : codes) {
        DefinedCode rd = definitions.getKnownResources().get(s);
        ConceptDefinitionComponent c = cs.addConcept();
        Map<String, String> t;
        if (rd == null) {
            t = translator.translations(s);
            c.setCode(s);
            c.setDisplay(definitions.getBaseResources().get(s).getName());
            c.setDefinition((definitions.getBaseResources().get(s).isAbstract() ? "--- Abstract Type! ---" : "") + definitions.getBaseResources().get(s).getDefinition());
        } else {
            t = translator.translations(rd.getCode());
            c.setCode(rd.getCode());
            c.setDisplay(rd.getCode());
            c.setDefinition(rd.getDefinition());
        }
        if (t != null) {
            for (String l : t.keySet()) c.addDesignation().setLanguage(l).setValue(t.get(l)).getUse().setSystem("http://terminology.hl7.org/CodeSystem/designation-usage").setCode("display");
        }
    }
    markSpecialStatus(vs, cs, true);
}

Example 3 with PackageInfo

use of org.hl7.fhir.utilities.npm.PackageInfo in project kindling by HL7.

the class ValueSetGenerator method genMessageEvents.

private void genMessageEvents(ValueSet vs) {
    if (!vs.hasCompose())
        vs.setCompose(new ValueSetComposeComponent());
    vs.getCompose().addInclude().setSystem("http://hl7.org/fhir/message-events");
    vs.setUserData("filename", "valueset-" + vs.getId());
    if (!vs.hasExtension(ToolingExtensions.EXT_WORKGROUP)) {
        vs.addExtension().setUrl(ToolingExtensions.EXT_WORKGROUP).setValue(new CodeType("fhir"));
    } else {
        String ec = ToolingExtensions.readStringExtension(vs, ToolingExtensions.EXT_WORKGROUP);
        if (!ec.equals("fhir"))
            System.out.println("ValueSet " + vs.getUrl() + " WG mismatch 10: is " + ec + ", want to set to " + "fhir");
    }
    vs.setUserData("path", "valueset-" + vs.getId() + ".html");
    CodeSystem cs = new CodeSystem();
    CodeSystemConvertor.populate(cs, vs);
    cs.setUserData("filename", vs.getUserString("filename").replace("valueset-", "codesystem-"));
    cs.setUserData("path", vs.getUserString("path").replace("valueset-", "codesystem-"));
    cs.setUrl("http://hl7.org/fhir/message-events");
    cs.setVersion(version);
    cs.setCaseSensitive(true);
    cs.setContent(CodeSystemContentMode.COMPLETE);
    definitions.getCodeSystems().see(cs, packageInfo);
    List<String> codes = new ArrayList<String>();
    codes.addAll(definitions.getEvents().keySet());
    Collections.sort(codes);
    for (String s : codes) {
        ConceptDefinitionComponent c = cs.addConcept();
        EventDefn e = definitions.getEvents().get(s);
        c.setCode(s);
        c.setDisplay(transform(e.getCode(), e.getTitle()));
        c.setDefinition(e.getDefinition());
    }
    markSpecialStatus(vs, cs, false);
}

Example 4 with PackageInfo

use of org.hl7.fhir.utilities.npm.PackageInfo in project kindling by HL7.

the class ValueSetGenerator method genDataTypes.

private void genDataTypes(ValueSet vs) throws Exception {
    if (!vs.hasCompose())
        vs.setCompose(new ValueSetComposeComponent());
    vs.getCompose().addInclude().setSystem("http://hl7.org/fhir/data-types");
    vs.setUserData("filename", "valueset-" + vs.getId());
    if (!vs.hasExtension(ToolingExtensions.EXT_WORKGROUP)) {
        vs.addExtension().setUrl(ToolingExtensions.EXT_WORKGROUP).setValue(new CodeType("fhir"));
    } else {
        String ec = ToolingExtensions.readStringExtension(vs, ToolingExtensions.EXT_WORKGROUP);
        if (!ec.equals("fhir"))
            System.out.println("ValueSet " + vs.getUrl() + " WG mismatch 6: is " + ec + ", want to set to " + "fhir");
    }
    vs.setUserData("path", "valueset-" + vs.getId() + ".html");
    CodeSystem cs = new CodeSystem();
    CodeSystemConvertor.populate(cs, vs);
    cs.setUrl("http://hl7.org/fhir/data-types");
    cs.setVersion(version);
    cs.setCaseSensitive(true);
    cs.setContent(CodeSystemContentMode.COMPLETE);
    definitions.getCodeSystems().see(cs, packageInfo);
    List<String> codes = new ArrayList<String>();
    for (TypeRef t : definitions.getKnownTypes()) codes.add(t.getName());
    Collections.sort(codes);
    for (String s : codes) {
        if (!definitions.dataTypeIsSharedInfo(s)) {
            ConceptDefinitionComponent c = cs.addConcept();
            c.setCode(s);
            c.setDisplay(s);
            if (definitions.getPrimitives().containsKey(s))
                c.setDefinition(definitions.getPrimitives().get(s).getDefinition());
            else if (definitions.getConstraints().containsKey(s))
                // don't add these: c.setDefinition(definitions.getConstraints().get(s).getDefinition());
                ;
            else if (definitions.hasElementDefn(s))
                c.setDefinition(definitions.getElementDefn(s).getDefinition());
            else
                c.setDefinition("...to do...");
        }
    }
    ToolingExtensions.addCSComment(cs.addConcept().setCode("xhtml").setDisplay("XHTML").setDefinition("XHTML format, as defined by W3C, but restricted usage (mainly, no active content)"), "Special case: xhtml can only be used in the narrative Data Type");
    markSpecialStatus(vs, cs, true);
}

Example 5 with PackageInfo

use of org.hl7.fhir.utilities.npm.PackageInfo in project kindling by HL7.

the class ValueSetGenerator method loadOperationOutcomeValueSet.

public void loadOperationOutcomeValueSet(BindingSpecification cd) throws Exception {
    ValueSet vs = new ValueSet();
    cd.setValueSet(vs);
    cd.setBindingMethod(BindingMethod.ValueSet);
    vs.setId("operation-outcome");
    vs.setUrl("http://hl7.org/fhir/ValueSet/" + vs.getId());
    vs.setName("OperationOutcomeCodes");
    vs.setTitle("Operation Outcome Codes");
    vs.setPublisher("HL7 (FHIR Project)");
    vs.setVersion(version);
    vs.setUserData("filename", "valueset-" + vs.getId());
    if (!vs.hasExtension(ToolingExtensions.EXT_WORKGROUP)) {
        vs.addExtension().setUrl(ToolingExtensions.EXT_WORKGROUP).setValue(new CodeType("fhir"));
    } else {
        String ec = ToolingExtensions.readStringExtension(vs, ToolingExtensions.EXT_WORKGROUP);
        if (!ec.equals("fhir"))
            System.out.println("ValueSet " + vs.getUrl() + " WG mismatch 11: is " + ec + ", want to set to " + "fhir");
    }
    vs.setUserData("path", "valueset-" + vs.getId() + ".html");
    ContactDetail c = vs.addContact();
    c.addTelecom().setSystem(ContactPointSystem.URL).setValue("http://hl7.org/fhir");
    c.addTelecom().setSystem(ContactPointSystem.EMAIL).setValue("fhir@lists.hl7.org");
    vs.setDescription("Operation Outcome codes used by FHIR test servers (see Implementation file translations.xml)");
    vs.setStatus(PublicationStatus.DRAFT);
    if (!vs.hasCompose())
        vs.setCompose(new ValueSetComposeComponent());
    vs.getCompose().addInclude().setSystem("http://terminology.hl7.org/CodeSystem/operation-outcome");
    CodeSystem cs = new CodeSystem();
    cs.setHierarchyMeaning(CodeSystemHierarchyMeaning.ISA);
    Set<String> codes = translator.listTranslations("ecode");
    for (String s : sorted(codes)) {
        Map<String, String> langs = translator.translations(s);
        ConceptDefinitionComponent cv = cs.addConcept();
        cv.setCode(s);
        cv.setDisplay(langs.get("en"));
        for (String lang : langs.keySet()) {
            if (!lang.equals("en")) {
                String value = langs.get(lang);
                ConceptDefinitionDesignationComponent dc = cv.addDesignation();
                dc.setLanguage(lang);
                dc.setValue(value);
                dc.getUse().setSystem("http://terminology.hl7.org/CodeSystem/designation-usage").setCode("display");
            }
        }
    }
    CodeSystemConvertor.populate(cs, vs);
    cs.setUrl("http://terminology.hl7.org/CodeSystem/operation-outcome");
    cs.setVersion(version);
    cs.setCaseSensitive(true);
    cs.setContent(CodeSystemContentMode.COMPLETE);
    definitions.getCodeSystems().see(cs, packageInfo);
}