Examples with Result org.orcid.jaxb.model.v3.dev1.search.Result used on opensource projects

Example 1 with Result

use of org.orcid.jaxb.model.v3.dev1.search.Result in project ORCID-Source by ORCID.

the class MemberV3ApiServiceDelegator_GeneralTest method testSearchByQuery.

@Test
public void testSearchByQuery() {
    Search search = new Search();
    Result result = new Result();
    result.setOrcidIdentifier(new OrcidIdentifier("some-orcid-id"));
    search.getResults().add(result);
    OrcidSearchManager orcidSearchManager = Mockito.mock(OrcidSearchManagerImpl.class);
    Mockito.when(orcidSearchManager.findOrcidIds(Matchers.<Map<String, List<String>>>any())).thenReturn(search);
    OrcidSecurityManager orcidSecurityManager = Mockito.mock(OrcidSecurityManagerImpl.class);
    Mockito.doNothing().when(orcidSecurityManager).checkScopes(Mockito.any(ScopePathType.class));
    MemberV3ApiServiceDelegatorImpl delegator = new MemberV3ApiServiceDelegatorImpl();
    ReflectionTestUtils.setField(delegator, "orcidSearchManager", orcidSearchManager);
    ReflectionTestUtils.setField(delegator, "orcidSecurityManager", orcidSecurityManager);
    Response response = delegator.searchByQuery(new HashMap<String, List<String>>());
    assertNotNull(response);
    assertNotNull(response.getEntity());
    assertTrue(response.getEntity() instanceof Search);
    assertEquals(1, ((Search) response.getEntity()).getResults().size());
    assertEquals("some-orcid-id", ((Search) response.getEntity()).getResults().get(0).getOrcidIdentifier().getPath());
}

Example 2 with Result

use of org.orcid.jaxb.model.v3.dev1.search.Result in project ORCID-Source by ORCID.

the class PeerReviewManagerReadOnlyImpl method groupPeerReviews.

/**
 * Generate a grouped list of peer reviews with the given list of peer reviews
 *
 * @param peerReviews
 *          The list of peer reviews to group
 * @param justPublic
 *          Specify if we want to group only the public elements in the given list
 * @return PeerReviews element with the PeerReviewSummary elements grouped
 */
@Override
public PeerReviews groupPeerReviews(List<PeerReviewSummary> peerReviews, boolean justPublic) {
    ActivitiesGroupGenerator groupGenerator = new ActivitiesGroupGenerator();
    PeerReviews result = new PeerReviews();
    for (PeerReviewSummary peerReview : peerReviews) {
        if (justPublic && !peerReview.getVisibility().equals(org.orcid.jaxb.model.v3.dev1.common.Visibility.PUBLIC)) {
        // If it is just public and the funding is not public, just
        // ignore it
        } else {
            groupGenerator.group(peerReview);
        }
    }
    List<ActivitiesGroup> groups = groupGenerator.getGroups();
    for (ActivitiesGroup group : groups) {
        Set<GroupAble> groupKeys = group.getGroupKeys();
        Set<GroupableActivity> activities = group.getActivities();
        PeerReviewGroup peerReviewGroup = new PeerReviewGroup();
        // Fill the peer review groups with the external identifiers
        if (groupKeys == null || groupKeys.isEmpty()) {
            // Initialize the ids as an empty list
            peerReviewGroup.getIdentifiers().getExternalIdentifier();
        } else {
            for (GroupAble groupKey : groupKeys) {
                PeerReviewGroupKey key = (PeerReviewGroupKey) groupKey;
                ExternalID id = new ExternalID();
                // TODO: this is not nice
                id.setType(PeerReviewGroupKey.KEY_NAME);
                id.setValue(key.getGroupId());
                peerReviewGroup.getIdentifiers().getExternalIdentifier().add(id);
            }
        }
        // Fill the peer review group with the list of activities
        for (GroupableActivity activity : activities) {
            PeerReviewSummary peerReviewSummary = (PeerReviewSummary) activity;
            peerReviewGroup.getPeerReviewSummary().add(peerReviewSummary);
        }
        // Sort the peer reviews
        Collections.sort(peerReviewGroup.getPeerReviewSummary(), new GroupableActivityComparator());
        result.getPeerReviewGroup().add(peerReviewGroup);
    }
    return result;
}

Example 3 with Result

use of org.orcid.jaxb.model.v3.dev1.search.Result in project ORCID-Source by ORCID.

the class ProfileFundingManagerReadOnlyImpl method groupFundings.

/**
 * Generate a grouped list of funding with the given list of funding
 *
 * @param fundings
 *          The list of fundings to group
 * @param justPublic
 *          Specify if we want to group only the public elements in the given list
 * @return Fundings element with the FundingSummary elements grouped
 */
@Override
public Fundings groupFundings(List<FundingSummary> fundings, boolean justPublic) {
    ActivitiesGroupGenerator groupGenerator = new ActivitiesGroupGenerator();
    Fundings result = new Fundings();
    for (FundingSummary funding : fundings) {
        if (justPublic && !funding.getVisibility().equals(org.orcid.jaxb.model.v3.dev1.common.Visibility.PUBLIC)) {
        // If it is just public and the funding is not public, just
        // ignore it
        } else {
            groupGenerator.group(funding);
        }
    }
    List<ActivitiesGroup> groups = groupGenerator.getGroups();
    for (ActivitiesGroup group : groups) {
        Set<GroupAble> externalIdentifiers = group.getGroupKeys();
        Set<GroupableActivity> activities = group.getActivities();
        FundingGroup fundingGroup = new FundingGroup();
        // Fill the funding groups with the external identifiers
        if (externalIdentifiers == null || externalIdentifiers.isEmpty()) {
            // Initialize the ids as an empty list
            fundingGroup.getIdentifiers().getExternalIdentifier();
        } else {
            for (GroupAble extId : externalIdentifiers) {
                ExternalID fundingExtId = (ExternalID) extId;
                fundingGroup.getIdentifiers().getExternalIdentifier().add(fundingExtId.clone());
            }
        }
        // Fill the funding group with the list of activities
        for (GroupableActivity activity : activities) {
            FundingSummary fundingSummary = (FundingSummary) activity;
            fundingGroup.getFundingSummary().add(fundingSummary);
        }
        // Sort the fundings
        Collections.sort(fundingGroup.getFundingSummary(), new GroupableActivityComparator());
        result.getFundingGroup().add(fundingGroup);
    }
    return result;
}

Example 4 with Result

use of org.orcid.jaxb.model.v3.dev1.search.Result in project ORCID-Source by ORCID.

the class BlackBoxBaseV3_0_dev1 method unmarshallFromPath.

public Object unmarshallFromPath(String path, Class<?> type) {
    try (Reader reader = new InputStreamReader(getClass().getResourceAsStream(path))) {
        Object obj = unmarshall(reader, type);
        Object result = null;
        if (Address.class.equals(type)) {
            result = (Address) obj;
        } else if (Education.class.equals(type)) {
            result = (Education) obj;
        } else if (Employment.class.equals(type)) {
            result = (Employment) obj;
        } else if (Funding.class.equals(type)) {
            result = (Funding) obj;
        } else if (Keyword.class.equals(type)) {
            result = (Keyword) obj;
        } else if (Work.class.equals(type)) {
            result = (Work) obj;
        } else if (PeerReview.class.equals(type)) {
            result = (PeerReview) obj;
        } else if (ResearcherUrl.class.equals(type)) {
            result = (ResearcherUrl) obj;
        } else if (PersonalDetails.class.equals(type)) {
            result = (PersonalDetails) obj;
        } else if (OtherName.class.equals(type)) {
            result = (OtherName) obj;
        } else if (PersonExternalIdentifier.class.equals(type)) {
            result = (PersonExternalIdentifier) obj;
        } else if (Distinction.class.equals(type)) {
            result = (Distinction) obj;
        } else if (InvitedPosition.class.equals(type)) {
            result = (InvitedPosition) obj;
        } else if (Membership.class.equals(type)) {
            result = (Membership) obj;
        } else if (Qualification.class.equals(type)) {
            result = (Qualification) obj;
        } else if (Service.class.equals(type)) {
            result = (Service) obj;
        }
        return result;
    } catch (IOException e) {
        throw new RuntimeException("Error reading notification from classpath", e);
    }
}

Example 5 with Result

use of org.orcid.jaxb.model.v3.dev1.search.Result in project ORCID-Source by ORCID.

the class WorksTest method testGroupingNormalized.

@Test
public void testGroupingNormalized() throws InterruptedException, JSONException {
    long time = System.currentTimeMillis();
    String accessTokenForClient1 = getAccessToken();
    String accessTokenForClient2 = getAccessToken(getUser1OrcidId(), getUser1Password(), getScopes(ScopePathType.ACTIVITIES_UPDATE, ScopePathType.ACTIVITIES_READ_LIMITED), getClient2ClientId(), getClient2ClientSecret(), getClient2RedirectUri());
    // should result in two groups
    Work work1 = (Work) unmarshallFromPath("/record_3.0_dev1/samples/read_samples/work-3.0_dev1.xml", Work.class);
    work1.setPutCode(null);
    work1.setSource(null);
    work1.setVisibility(Visibility.PUBLIC);
    work1.getExternalIdentifiers().getExternalIdentifier().clear();
    org.orcid.jaxb.model.v3.dev1.record.WorkTitle title1 = new org.orcid.jaxb.model.v3.dev1.record.WorkTitle();
    title1.setTitle(new Title("Work # 1" + time));
    work1.setWorkTitle(title1);
    ExternalID wExtId1 = new ExternalID();
    wExtId1.setValue("VALUE" + time);
    wExtId1.setType(WorkExternalIdentifierType.AGR.value());
    wExtId1.setRelationship(Relationship.SELF);
    wExtId1.setUrl(new Url("http://orcid.org/work#1"));
    work1.getExternalIdentifiers().getExternalIdentifier().clear();
    work1.getExternalIdentifiers().getExternalIdentifier().add(wExtId1);
    Work work2 = (Work) unmarshallFromPath("/record_3.0_dev1/samples/read_samples/work-3.0_dev1.xml", Work.class);
    work2.setPutCode(null);
    work2.setSource(null);
    work2.setVisibility(Visibility.PUBLIC);
    org.orcid.jaxb.model.v3.dev1.record.WorkTitle title2 = new org.orcid.jaxb.model.v3.dev1.record.WorkTitle();
    title2.setTitle(new Title("Work # 2" + time));
    work2.setWorkTitle(title2);
    work2.getExternalIdentifiers().getExternalIdentifier().clear();
    ExternalID wExtId2 = new ExternalID();
    wExtId2.setValue("value" + time);
    wExtId2.setType(WorkExternalIdentifierType.AGR.value());
    wExtId2.setRelationship(Relationship.SELF);
    wExtId2.setUrl(new Url("http://orcid.org/work#2"));
    work2.getExternalIdentifiers().getExternalIdentifier().clear();
    work2.getExternalIdentifiers().getExternalIdentifier().add(wExtId2);
    Work work3 = (Work) unmarshallFromPath("/record_3.0_dev1/samples/read_samples/work-3.0_dev1.xml", Work.class);
    work3.setPutCode(null);
    work3.setSource(null);
    work3.setVisibility(Visibility.PUBLIC);
    org.orcid.jaxb.model.v3.dev1.record.WorkTitle title3 = new org.orcid.jaxb.model.v3.dev1.record.WorkTitle();
    title3.setTitle(new Title("Work # 3" + time));
    work3.setWorkTitle(title3);
    work3.getExternalIdentifiers().getExternalIdentifier().clear();
    ExternalID wExtId3 = new ExternalID();
    wExtId3.setValue("OtherValue" + time);
    wExtId3.setType(WorkExternalIdentifierType.AGR.value());
    wExtId3.setRelationship(Relationship.SELF);
    wExtId3.setUrl(new Url("http://orcid.org/work#3"));
    work3.getExternalIdentifiers().getExternalIdentifier().clear();
    work3.getExternalIdentifiers().getExternalIdentifier().add(wExtId3);
    // Add the three works
    ClientResponse postResponse = memberV3Dev1ApiClient.createWorkXml(this.getUser1OrcidId(), work1, accessTokenForClient1);
    assertNotNull(postResponse);
    assertEquals(Response.Status.CREATED.getStatusCode(), postResponse.getStatus());
    Long putCode1 = getPutCodeFromResponse(postResponse);
    postResponse = memberV3Dev1ApiClient.createWorkXml(this.getUser1OrcidId(), work2, accessTokenForClient2);
    assertNotNull(postResponse);
    assertEquals(Response.Status.CREATED.getStatusCode(), postResponse.getStatus());
    Long putCode2 = getPutCodeFromResponse(postResponse);
    postResponse = memberV3Dev1ApiClient.createWorkXml(this.getUser1OrcidId(), work3, accessTokenForClient2);
    assertNotNull(postResponse);
    assertEquals(Response.Status.CREATED.getStatusCode(), postResponse.getStatus());
    Long putCode3 = getPutCodeFromResponse(postResponse);
    ClientResponse activitiesResponse = memberV3Dev1ApiClient.viewActivities(this.getUser1OrcidId(), accessTokenForClient1);
    assertEquals(Response.Status.OK.getStatusCode(), activitiesResponse.getStatus());
    ActivitiesSummary activities = activitiesResponse.getEntity(ActivitiesSummary.class);
    assertNotNull(activities);
    assertFalse(activities.getWorks().getWorkGroup().isEmpty());
    WorkGroup work1Group = null;
    WorkGroup work2Group = null;
    WorkGroup work3Group = null;
    boolean work1found = false;
    boolean work2found = false;
    boolean work3found = false;
    for (WorkGroup group : activities.getWorks().getWorkGroup()) {
        for (ExternalID id : group.getIdentifiers().getExternalIdentifier()) {
            // If it is the ID is the one we are looking for
            if (id.getNormalized().getValue().equals("value" + time)) {
                for (WorkSummary summary : group.getWorkSummary()) {
                    String title = summary.getTitle().getTitle().getContent();
                    if (("Work # 1" + time).equals(title)) {
                        work1found = true;
                        work1Group = group;
                        assertEquals(2, group.getActivities().size());
                    } else if (("Work # 2" + time).equals(title)) {
                        work2found = true;
                        work2Group = group;
                        assertEquals(2, group.getActivities().size());
                    } else
                        fail();
                }
            } else if (id.getNormalized().getValue().equals("othervalue" + time)) {
                for (WorkSummary summary : group.getWorkSummary()) {
                    String title = summary.getTitle().getTitle().getContent();
                    if (("Work # 3" + time).equals(title)) {
                        work3found = true;
                        work3Group = group;
                        assertEquals(1, group.getActivities().size());
                    } else
                        fail();
                }
            }
        }
    }
    assertTrue(work1found);
    assertTrue(work2found);
    assertTrue(work3found);
    // Check that work # 1 and Work # 2 are in the same work
    assertEquals(work1Group, work2Group);
    // Check that work # 3 is not in the same group than group # 1
    assertThat(work3Group, not(work1Group));
    // Remove all created works
    ClientResponse deleteResponse = memberV3Dev1ApiClient.deleteWorkXml(this.getUser1OrcidId(), putCode1, accessTokenForClient1);
    assertNotNull(deleteResponse);
    assertEquals(Response.Status.NO_CONTENT.getStatusCode(), deleteResponse.getStatus());
    deleteResponse = memberV3Dev1ApiClient.deleteWorkXml(this.getUser1OrcidId(), putCode2, accessTokenForClient2);
    assertNotNull(deleteResponse);
    assertEquals(Response.Status.NO_CONTENT.getStatusCode(), deleteResponse.getStatus());
    deleteResponse = memberV3Dev1ApiClient.deleteWorkXml(this.getUser1OrcidId(), putCode3, accessTokenForClient2);
    assertNotNull(deleteResponse);
    assertEquals(Response.Status.NO_CONTENT.getStatusCode(), deleteResponse.getStatus());
}