Examples with Cursor net.imglib2.Cursor used on opensource projects

Example 26 with Cursor

use of net.imglib2.Cursor in project imagej-ops by imagej.

the class IntervalViewTest method defaultIntervalTest.

@Test
public void defaultIntervalTest() {
    Img<DoubleType> img = new ArrayImgFactory<DoubleType>().create(new int[] { 10, 10 }, new DoubleType());
    Random r = new Random();
    for (DoubleType d : img) {
        d.set(r.nextDouble());
    }
    Cursor<DoubleType> il2 = Views.interval(img, img).localizingCursor();
    RandomAccess<DoubleType> opr = ops.transform().intervalView(img, img).randomAccess();
    while (il2.hasNext()) {
        DoubleType e = il2.next();
        opr.setPosition(il2);
        assertEquals(e.get(), opr.get().get(), 1e-10);
    }
}

Example 27 with Cursor

use of net.imglib2.Cursor in project imagej-ops by imagej.

the class PermuteViewTest method testIntervalPermuteCoordinates.

@Test
public void testIntervalPermuteCoordinates() {
    Img<DoubleType> img = ArrayImgs.doubles(2, 2);
    Cursor<DoubleType> c = img.cursor();
    Random r = new Random();
    while (c.hasNext()) {
        c.next().set(r.nextDouble());
    }
    IntervalView<DoubleType> expected = Views.permuteCoordinates(img, new int[] { 0, 1 });
    Cursor<DoubleType> e = expected.cursor();
    RandomAccessibleInterval<DoubleType> actual = ops.transform().permuteCoordinatesView(img, new int[] { 0, 1 });
    RandomAccess<DoubleType> actualRA = actual.randomAccess();
    while (e.hasNext()) {
        e.next();
        actualRA.setPosition(e);
        assertEquals(e.get().get(), actualRA.get().get(), 1e-10);
    }
    assertTrue(Intervals.equals(expected, actual));
}

Example 28 with Cursor

use of net.imglib2.Cursor in project imagej-ops by imagej.

the class PermuteViewTest method testIntervalPermuteInverseDimensionCoordinates.

@Test
public void testIntervalPermuteInverseDimensionCoordinates() {
    Img<DoubleType> img = ArrayImgs.doubles(2, 2);
    Cursor<DoubleType> c = img.cursor();
    Random r = new Random();
    while (c.hasNext()) {
        c.next().set(r.nextDouble());
    }
    IntervalView<DoubleType> expected = Views.permuteCoordinateInverse(img, new int[] { 0, 1 }, 1);
    Cursor<DoubleType> e = expected.cursor();
    RandomAccessibleInterval<DoubleType> actual = ops.transform().permuteCoordinatesInverseView(img, new int[] { 0, 1 }, 1);
    RandomAccess<DoubleType> actualRA = actual.randomAccess();
    while (e.hasNext()) {
        e.next();
        actualRA.setPosition(e);
        assertEquals(e.get().get(), actualRA.get().get(), 1e-10);
    }
    assertTrue(Intervals.equals(expected, actual));
}

Example 29 with Cursor

use of net.imglib2.Cursor in project imagej-ops by imagej.

the class PermuteViewTest method permuteCoordinatesInverseOfDimensionTest.

@Test
public void permuteCoordinatesInverseOfDimensionTest() {
    Img<DoubleType> img = new ArrayImgFactory<DoubleType>().create(new int[] { 2, 2 }, new DoubleType());
    Cursor<DoubleType> c = img.cursor();
    Random r = new Random();
    while (c.hasNext()) {
        c.next().set(r.nextDouble());
    }
    IntervalView<DoubleType> out = Views.permuteCoordinateInverse(img, new int[] { 0, 1 }, 1);
    Cursor<DoubleType> il2 = out.cursor();
    RandomAccess<DoubleType> opr = ops.transform().permuteCoordinatesInverseView(img, new int[] { 0, 1 }, 1).randomAccess();
    while (il2.hasNext()) {
        il2.next();
        opr.setPosition(il2);
        assertEquals(il2.get().get(), opr.get().get(), 1e-10);
    }
}

Example 30 with Cursor

use of net.imglib2.Cursor in project imagej-ops by imagej.

the class PermuteViewTest method testIntervalPermuteDimensionCoordinates.

@Test
public void testIntervalPermuteDimensionCoordinates() {
    Img<DoubleType> img = ArrayImgs.doubles(2, 2);
    Cursor<DoubleType> c = img.cursor();
    Random r = new Random();
    while (c.hasNext()) {
        c.next().set(r.nextDouble());
    }
    IntervalView<DoubleType> expected = Views.permuteCoordinates(img, new int[] { 0, 1 }, 1);
    Cursor<DoubleType> e = expected.cursor();
    RandomAccessibleInterval<DoubleType> actual = ops.transform().permuteCoordinatesView(img, new int[] { 0, 1 }, 1);
    RandomAccess<DoubleType> actualRA = actual.randomAccess();
    while (e.hasNext()) {
        e.next();
        actualRA.setPosition(e);
        assertEquals(e.get().get(), actualRA.get().get(), 1e-10);
    }
    assertTrue(Intervals.equals(expected, actual));
}