Examples with RectangleShape net.imglib2.algorithm.neighborhood.RectangleShape used on opensource projects

Example 6 with RectangleShape

use of net.imglib2.algorithm.neighborhood.RectangleShape in project imagej-ops by imagej.

the class LocalThresholdTest method testLocalShanbhagThreshold.

/**
 * @see LocalShanbhagThreshold
 */
@Test
public void testLocalShanbhagThreshold() {
    ops.run(Shanbhag.class, out, in, new RectangleShape(1, false), new OutOfBoundsMirrorFactory<ByteType, Img<ByteType>>(Boundary.SINGLE));
    assertEquals(false, out.firstElement().get());
}

Example 7 with RectangleShape

use of net.imglib2.algorithm.neighborhood.RectangleShape in project imagej-ops by imagej.

the class LocalThresholdTest method testLocalNiblackThresholdIntegral.

/**
 * @see LocalNiblackThresholdIntegral
 */
@Test
public void testLocalNiblackThresholdIntegral() {
    ops.run(LocalNiblackThresholdIntegral.class, out, in, new RectangleShape(3, false), new OutOfBoundsMirrorFactory<ByteType, Img<ByteType>>(Boundary.SINGLE), 0.2, 0.0);
    assertEquals(true, out.firstElement().get());
}

Example 8 with RectangleShape

use of net.imglib2.algorithm.neighborhood.RectangleShape in project imagej-ops by imagej.

the class LocalThresholdTest method testLocalNiblackThreshold.

/**
 * @see LocalNiblackThreshold
 */
@Test
public void testLocalNiblackThreshold() {
    ops.run(LocalNiblackThreshold.class, out, in, new RectangleShape(1, false), new OutOfBoundsMirrorFactory<ByteType, Img<ByteType>>(Boundary.SINGLE), 0.2, 0.0);
    assertEquals(true, out.firstElement().get());
}

Example 9 with RectangleShape

use of net.imglib2.algorithm.neighborhood.RectangleShape in project imagej-ops by imagej.

the class LocalThresholdTest method testLocalLiThreshold.

/**
 * @see LocalLiThreshold
 */
@Test
public void testLocalLiThreshold() {
    ops.run(Li.class, out, in, new RectangleShape(1, false), new OutOfBoundsMirrorFactory<ByteType, Img<ByteType>>(Boundary.SINGLE));
    assertEquals(true, out.firstElement().get());
}

Example 10 with RectangleShape

use of net.imglib2.algorithm.neighborhood.RectangleShape in project imagej-ops by imagej.

the class LocalThresholdTest method testLocalMeanResultsConsistency.

/**
 * @see LocalMeanThresholdIntegral
 * @see LocalMeanThreshold
 */
@Test
public void testLocalMeanResultsConsistency() {
    Img<BitType> out2 = null;
    Img<BitType> out3 = null;
    try {
        out2 = in.factory().imgFactory(new BitType()).create(in, new BitType());
        out3 = in.factory().imgFactory(new BitType()).create(in, new BitType());
    } catch (IncompatibleTypeException exc) {
        exc.printStackTrace();
    }
    // Default implementation
    ops.run(LocalMeanThreshold.class, out2, in, new RectangleShape(2, false), new OutOfBoundsMirrorFactory<ByteType, Img<ByteType>>(Boundary.SINGLE), 0.0);
    // Integral image-based implementation
    ops.run(LocalMeanThresholdIntegral.class, out3, in, new RectangleShape(2, false), new OutOfBoundsMirrorFactory<ByteType, Img<ByteType>>(Boundary.SINGLE), 0.0);
    testIterableIntervalSimilarity(out2, out3);
}