Examples with ArrayImgFactory net.imglib2.img.array.ArrayImgFactory used on opensource projects

Example 56 with ArrayImgFactory

use of net.imglib2.img.array.ArrayImgFactory in project imagej-ops by imagej.

the class TranslateViewTest method defaultTranslateTest.

@Test
public void defaultTranslateTest() {
    Img<DoubleType> img = new ArrayImgFactory<DoubleType>().create(new int[] { 10, 10 }, new DoubleType());
    MixedTransformView<DoubleType> il2 = Views.translate(deinterval(img), 2, 5);
    MixedTransformView<DoubleType> opr = ops.transform().translateView(deinterval(img), 2, 5);
    for (int i = 0; i < il2.getTransformToSource().getMatrix().length; i++) {
        for (int j = 0; j < il2.getTransformToSource().getMatrix()[i].length; j++) {
            assertEquals(il2.getTransformToSource().getMatrix()[i][j], opr.getTransformToSource().getMatrix()[i][j], 1e-10);
        }
    }
}

Example 57 with ArrayImgFactory

use of net.imglib2.img.array.ArrayImgFactory in project imagej-ops by imagej.

the class ZeroMinViewTest method defaultZeroMinTest.

@Test
public void defaultZeroMinTest() {
    Img<DoubleType> img = new ArrayImgFactory<DoubleType>().create(new int[] { 10, 10 }, new DoubleType());
    IntervalView<DoubleType> imgTranslated = Views.interval(Views.translate((RandomAccessible<DoubleType>) img, 2, 5), new long[] { 2, 5 }, new long[] { 12, 15 });
    IntervalView<DoubleType> il2 = Views.zeroMin(imgTranslated);
    IntervalView<DoubleType> opr = ops.transform().zeroMinView(imgTranslated);
    assertTrue(Views.isZeroMin(il2) == Views.isZeroMin(opr));
}

Example 58 with ArrayImgFactory

use of net.imglib2.img.array.ArrayImgFactory in project imagej-ops by imagej.

the class CreateLabelingTest method testImageFactory.

@SuppressWarnings("unchecked")
@Test
public void testImageFactory() {
    final Dimensions dim = new FinalDimensions(10, 10, 10);
    assertEquals("Labeling Factory: ", ArrayImgFactory.class, ((Img<?>) ((ImgLabeling<String, ?>) ops.run(DefaultCreateImgLabeling.class, dim, null, new ArrayImgFactory<IntType>())).getIndexImg()).factory().getClass());
    assertEquals("Labeling Factory: ", CellImgFactory.class, ((Img<?>) ((ImgLabeling<String, ?>) ops.run(DefaultCreateImgLabeling.class, dim, null, new CellImgFactory<IntType>())).getIndexImg()).factory().getClass());
}

Example 59 with ArrayImgFactory

use of net.imglib2.img.array.ArrayImgFactory in project imagej-ops by imagej.

the class CopyRAITest method createData.

@Before
public void createData() {
    input = new ArrayImgFactory<UnsignedByteType>().create(new int[] { 120, 100 }, new UnsignedByteType());
    final Random r = new Random(System.currentTimeMillis());
    final Cursor<UnsignedByteType> inc = input.cursor();
    while (inc.hasNext()) {
        inc.next().setReal(r.nextDouble() * 255);
    }
    // create
    final long[] start = new long[] { 16, 16, 16 };
    final long[] end = new long[] { 47, 47, 47 };
    // create an input with a cube at the center
    input2 = ops.create().img(new FinalDimensions(size1), new UnsignedByteType());
    // create the same input but force it to be a planar image
    inputPlanar = ops.create().img(new FinalDimensions(size1), new UnsignedByteType(), new PlanarImgFactory<UnsignedByteType>());
    // get centered views
    view = Views.interval(input2, new FinalInterval(start, end));
    viewPlanar = Views.interval(inputPlanar, new FinalInterval(start, end));
    final Cursor<UnsignedByteType> cursor = view.cursor();
    final Cursor<UnsignedByteType> cursorPlanar = viewPlanar.cursor();
    // set every pixel in the view to 100
    while (cursor.hasNext()) {
        cursor.fwd();
        cursorPlanar.fwd();
        cursor.get().setReal(100.0);
        cursorPlanar.get().setReal(100.0);
    }
}