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Example 21 with ByteType

use of net.imglib2.type.numeric.integer.ByteType in project imagej-ops by imagej.

the class LocalThresholdTest method testLocalSauvolaIntegral.

/**
 * @see LocalSauvolaThresholdIntegral
 */
@Test
public void testLocalSauvolaIntegral() {
    ops.run(LocalSauvolaThresholdIntegral.class, out, in, new RectangleShape(2, false), new OutOfBoundsMirrorFactory<ByteType, Img<ByteType>>(Boundary.SINGLE), 0.5, 0.5);
    assertEquals(false, out.firstElement().get());
}
Also used : Img(net.imglib2.img.Img) ArrayImg(net.imglib2.img.array.ArrayImg) RectangleShape(net.imglib2.algorithm.neighborhood.RectangleShape) ByteType(net.imglib2.type.numeric.integer.ByteType) AbstractOpTest(net.imagej.ops.AbstractOpTest) Test(org.junit.Test)

Example 22 with ByteType

use of net.imglib2.type.numeric.integer.ByteType in project imagej-ops by imagej.

the class LocalThresholdTest method testLocalBernsenThreshold.

/**
 * @see LocalBernsenThreshold
 */
@Test
public void testLocalBernsenThreshold() {
    ops.run(LocalBernsenThreshold.class, out, in, new RectangleShape(3, false), new OutOfBoundsMirrorFactory<ByteType, Img<ByteType>>(Boundary.SINGLE), 1.0, Double.MAX_VALUE * 0.5);
    assertEquals(true, out.firstElement().get());
}
Also used : Img(net.imglib2.img.Img) ArrayImg(net.imglib2.img.array.ArrayImg) RectangleShape(net.imglib2.algorithm.neighborhood.RectangleShape) ByteType(net.imglib2.type.numeric.integer.ByteType) AbstractOpTest(net.imagej.ops.AbstractOpTest) Test(org.junit.Test)

Example 23 with ByteType

use of net.imglib2.type.numeric.integer.ByteType in project imagej-ops by imagej.

the class LocalThresholdTest method testLocalThresholdMean.

/**
 * @see LocalMeanThreshold
 */
@Test
public void testLocalThresholdMean() {
    ops.run(LocalMeanThreshold.class, out, in, new RectangleShape(1, false), new OutOfBoundsMirrorFactory<ByteType, Img<ByteType>>(Boundary.SINGLE), 0.0);
    assertEquals(true, out.firstElement().get());
}
Also used : Img(net.imglib2.img.Img) ArrayImg(net.imglib2.img.array.ArrayImg) RectangleShape(net.imglib2.algorithm.neighborhood.RectangleShape) ByteType(net.imglib2.type.numeric.integer.ByteType) AbstractOpTest(net.imagej.ops.AbstractOpTest) Test(org.junit.Test)

Example 24 with ByteType

use of net.imglib2.type.numeric.integer.ByteType in project imagej-ops by imagej.

the class LocalThresholdTest method testLocalRosinThreshold.

/**
 * @see LocalRosinThreshold
 */
@Test
public void testLocalRosinThreshold() {
    ops.run(Rosin.class, out, in, new RectangleShape(1, false), new OutOfBoundsMirrorFactory<ByteType, Img<ByteType>>(Boundary.SINGLE));
    assertEquals(false, out.firstElement().get());
}
Also used : Img(net.imglib2.img.Img) ArrayImg(net.imglib2.img.array.ArrayImg) RectangleShape(net.imglib2.algorithm.neighborhood.RectangleShape) ByteType(net.imglib2.type.numeric.integer.ByteType) AbstractOpTest(net.imagej.ops.AbstractOpTest) Test(org.junit.Test)

Example 25 with ByteType

use of net.imglib2.type.numeric.integer.ByteType in project imagej-ops by imagej.

the class BlackTopHatTest method testSingleBlackTopHat.

@Test
public void testSingleBlackTopHat() {
    final Shape shape = new DiamondShape(1);
    final List<Shape> shapes = Arrays.asList(shape);
    @SuppressWarnings("unchecked") final Img<ByteType> out1 = (Img<ByteType>) ops.run(ListBlackTopHat.class, Img.class, in, shapes);
    final Img<ByteType> out2 = BlackTopHat.blackTopHat(in, shape, 1);
    assertIterationsEqual(out2, out1);
}
Also used : Img(net.imglib2.img.Img) DiamondShape(net.imglib2.algorithm.neighborhood.DiamondShape) Shape(net.imglib2.algorithm.neighborhood.Shape) RectangleShape(net.imglib2.algorithm.neighborhood.RectangleShape) HorizontalLineShape(net.imglib2.algorithm.neighborhood.HorizontalLineShape) DiamondShape(net.imglib2.algorithm.neighborhood.DiamondShape) ByteType(net.imglib2.type.numeric.integer.ByteType) AbstractOpTest(net.imagej.ops.AbstractOpTest) Test(org.junit.Test)

Aggregations

ByteType (net.imglib2.type.numeric.integer.ByteType)83 Test (org.junit.Test)78 AbstractOpTest (net.imagej.ops.AbstractOpTest)76 RectangleShape (net.imglib2.algorithm.neighborhood.RectangleShape)55 Img (net.imglib2.img.Img)49 ArrayImg (net.imglib2.img.array.ArrayImg)33 Shape (net.imglib2.algorithm.neighborhood.Shape)18 DiamondShape (net.imglib2.algorithm.neighborhood.DiamondShape)17 HorizontalLineShape (net.imglib2.algorithm.neighborhood.HorizontalLineShape)16 ArrayList (java.util.ArrayList)9 Op (net.imagej.ops.Op)9 IterableInterval (net.imglib2.IterableInterval)9 BitType (net.imglib2.type.logic.BitType)6 UnsignedByteType (net.imglib2.type.numeric.integer.UnsignedByteType)6 AbstractUnaryComputerOp (net.imagej.ops.special.computer.AbstractUnaryComputerOp)5 Ops (net.imagej.ops.Ops)4 RandomAccessibleInterval (net.imglib2.RandomAccessibleInterval)4 IncompatibleTypeException (net.imglib2.exception.IncompatibleTypeException)4 CreateImgFromImg (net.imagej.ops.create.img.CreateImgFromImg)3 MapOp (net.imagej.ops.map.MapOp)3