Examples with DummyCyEventHelper org.cytoscape.event.DummyCyEventHelper used on opensource projects

Example 6 with DummyCyEventHelper

use of org.cytoscape.event.DummyCyEventHelper in project cytoscape-impl by cytoscape.

the class CyTableTest method setUp.

@Before
public void setUp() {
    eventHelper = new DummyCyEventHelper();
    compiler = new EquationCompilerImpl(new EquationParserImpl(serviceRegistrar));
    final Interpreter interpreter = new InterpreterImpl();
    when(serviceRegistrar.getService(CyEventHelper.class)).thenReturn(eventHelper);
    when(serviceRegistrar.getService(CyNetworkNaming.class)).thenReturn(namingUtil);
    when(serviceRegistrar.getService(EquationCompiler.class)).thenReturn(compiler);
    when(serviceRegistrar.getService(Interpreter.class)).thenReturn(interpreter);
    table = new CyTableImpl("homer", CyIdentifiable.SUID, Long.class, false, true, SavePolicy.SESSION_FILE, eventHelper, ColumnDataFactory.createDefaultFactory(), interpreter, 1000);
    attrs = table.getRow(1L);
    table2 = new CyTableImpl("marge", CyIdentifiable.SUID, Long.class, false, true, SavePolicy.SESSION_FILE, eventHelper, ColumnDataFactory.createDefaultFactory(), interpreter, 1000);
    CyTableManagerImpl tblMgr = new CyTableManagerImpl(new CyNetworkTableManagerImpl(), new CyNetworkManagerImpl(serviceRegistrar), serviceRegistrar);
    tblMgr.addTable(table);
    ((CyTableImpl) table).handleEvent(new TableAddedEvent(tblMgr, table));
    tblMgr.addTable(table2);
    ((CyTableImpl) table2).handleEvent(new TableAddedEvent(tblMgr, table2));
}

Example 7 with DummyCyEventHelper

use of org.cytoscape.event.DummyCyEventHelper in project cytoscape-impl by cytoscape.

the class CySubNetworkTest method setUp.

@Before
public void setUp() {
    deh = new DummyCyEventHelper(true);
    deh2 = new DummyCyEventHelper(false);
    root = TestCyNetworkFactory.getPublicRootInstance(deh);
    root2 = TestCyNetworkFactory.getPublicRootInstance(deh2);
}

Example 8 with DummyCyEventHelper

use of org.cytoscape.event.DummyCyEventHelper in project cytoscape-impl by cytoscape.

the class DegreeTest method init.

@Before
public void init() {
    final CyNode node = mock(CyNode.class);
    when(node.getSUID()).thenReturn(101L);
    final List<CyEdge> edgeList = mock(List.class);
    when(edgeList.size()).thenReturn(3);
    final CyNetwork network = mock(CyNetwork.class);
    when(network.getAdjacentEdgeList(node, CyEdge.Type.ANY)).thenReturn(edgeList);
    when(network.getNode(101L)).thenReturn(node);
    Collection<CyNode> nodes = new ArrayList<>(1);
    nodes.add(node);
    applicationManager = mock(CyApplicationManager.class);
    when(applicationManager.getCurrentNetwork()).thenReturn(network);
    eventHelper = new DummyCyEventHelper();
    serviceRegistrar = mock(CyServiceRegistrar.class);
    when(serviceRegistrar.getService(CyApplicationManager.class)).thenReturn(applicationManager);
    when(serviceRegistrar.getService(CyEventHelper.class)).thenReturn(eventHelper);
}

Example 9 with DummyCyEventHelper

use of org.cytoscape.event.DummyCyEventHelper in project cytoscape-impl by cytoscape.

the class TargetIDTest method init.

@Before
public void init() {
    final CyNode node = mock(CyNode.class);
    when(node.getSUID()).thenReturn(101L);
    final List<CyEdge> edgeList = mock(List.class);
    when(edgeList.size()).thenReturn(3);
    final CyNetwork network = mock(CyNetwork.class);
    final CyEdge edge = mock(CyEdge.class);
    when(edge.getSUID()).thenReturn(11L);
    when(edge.getTarget()).thenReturn(node);
    Collection<CyEdge> edges = new ArrayList<CyEdge>(1);
    edges.add(edge);
    when(network.getEdge(11L)).thenReturn(edge);
    applicationManager = mock(CyApplicationManager.class);
    when(applicationManager.getCurrentNetwork()).thenReturn(network);
    eventHelper = new DummyCyEventHelper();
    serviceRegistrar = mock(CyServiceRegistrar.class);
    when(serviceRegistrar.getService(CyApplicationManager.class)).thenReturn(applicationManager);
    when(serviceRegistrar.getService(CyEventHelper.class)).thenReturn(eventHelper);
}

Example 10 with DummyCyEventHelper

use of org.cytoscape.event.DummyCyEventHelper in project cytoscape-impl by cytoscape.

the class TestCyNetworkFactory method setUp.

@Before
public void setUp() {
    MockitoAnnotations.initMocks(this);
    eh = new DummyCyEventHelper(false);
    Interpreter interpreter = new InterpreterImpl();
    EquationCompiler compiler = new EquationCompilerImpl(new EquationParserImpl(serviceRegistrar));
    when(serviceRegistrar.getService(CyEventHelper.class)).thenReturn(eh);
    when(serviceRegistrar.getService(CyNetworkNaming.class)).thenReturn(namingUtil);
    when(serviceRegistrar.getService(EquationCompiler.class)).thenReturn(compiler);
    when(serviceRegistrar.getService(Interpreter.class)).thenReturn(interpreter);
    netTblMgr = new CyNetworkTableManagerImpl();
    netMgr = new CyNetworkManagerImpl(serviceRegistrar);
    tblMgr = new CyTableManagerImpl(netTblMgr, netMgr, serviceRegistrar);
    tblFactory = new CyTableFactoryImpl(eh, serviceRegistrar);
    netFactory = new CyNetworkFactoryImpl(eh, tblMgr, netTblMgr, tblFactory, serviceRegistrar);
}