Examples with DummyCyEventHelper org.cytoscape.event.DummyCyEventHelper used on opensource projects

Example 1 with DummyCyEventHelper

use of org.cytoscape.event.DummyCyEventHelper in project cytoscape-impl by cytoscape.

the class InDegreeTest method init.

@Before
public void init() {
    final CyNode node = mock(CyNode.class);
    when(node.getSUID()).thenReturn(101L);
    final List<CyEdge> edgeList = mock(List.class);
    when(edgeList.size()).thenReturn(3);
    final CyNetwork network = mock(CyNetwork.class);
    when(network.getAdjacentEdgeList(node, CyEdge.Type.INCOMING)).thenReturn(edgeList);
    when(network.getNode(101L)).thenReturn(node);
    Collection<CyNode> nodes = new ArrayList<CyNode>(1);
    nodes.add(node);
    applicationManager = mock(CyApplicationManager.class);
    when(applicationManager.getCurrentNetwork()).thenReturn(network);
    eventHelper = new DummyCyEventHelper();
    serviceRegistrar = mock(CyServiceRegistrar.class);
    when(serviceRegistrar.getService(CyApplicationManager.class)).thenReturn(applicationManager);
    when(serviceRegistrar.getService(CyEventHelper.class)).thenReturn(eventHelper);
}

Example 2 with DummyCyEventHelper

use of org.cytoscape.event.DummyCyEventHelper in project cytoscape-impl by cytoscape.

the class SourceIDTest method init.

@Before
public void init() {
    final CyNode node = mock(CyNode.class);
    when(node.getSUID()).thenReturn(101L);
    final List<CyEdge> edgeList = mock(List.class);
    when(edgeList.size()).thenReturn(3);
    final CyNetwork network = mock(CyNetwork.class);
    final CyEdge edge = mock(CyEdge.class);
    when(edge.getSUID()).thenReturn(11L);
    when(edge.getSource()).thenReturn(node);
    Collection<CyEdge> edges = new ArrayList<CyEdge>(1);
    edges.add(edge);
    when(network.getEdge(11L)).thenReturn(edge);
    applicationManager = mock(CyApplicationManager.class);
    when(applicationManager.getCurrentNetwork()).thenReturn(network);
    eventHelper = new DummyCyEventHelper();
    serviceRegistrar = mock(CyServiceRegistrar.class);
    when(serviceRegistrar.getService(CyApplicationManager.class)).thenReturn(applicationManager);
    when(serviceRegistrar.getService(CyEventHelper.class)).thenReturn(eventHelper);
}

Example 3 with DummyCyEventHelper

use of org.cytoscape.event.DummyCyEventHelper in project cytoscape-impl by cytoscape.

the class InterpreterTest method init.

@Before
public void init() {
    eventHelper = new DummyCyEventHelper();
    serviceRegistrar = mock(CyServiceRegistrar.class);
    when(serviceRegistrar.getService(CyEventHelper.class)).thenReturn(eventHelper);
    parser = new EquationParserImpl(serviceRegistrar);
    compiler = new EquationCompilerImpl(parser);
    interpreter = new InterpreterImpl();
}

Example 4 with DummyCyEventHelper

use of org.cytoscape.event.DummyCyEventHelper in project cytoscape-impl by cytoscape.

the class AttribParserTest method init.

@Before
public void init() {
    eventHelper = new DummyCyEventHelper();
    serviceRegistrar = mock(CyServiceRegistrar.class);
    when(serviceRegistrar.getService(CyEventHelper.class)).thenReturn(eventHelper);
    parser = new EquationParserImpl(serviceRegistrar);
}

Example 5 with DummyCyEventHelper

use of org.cytoscape.event.DummyCyEventHelper in project cytoscape-impl by cytoscape.

the class CySubNetworkCyTableManagerTest method setUp.

@Before
public void setUp() {
    final CyEventHelper eh = new DummyCyEventHelper();
    final CyNetworkNaming namingUtil = mock(CyNetworkNaming.class);
    final CyServiceRegistrar serviceRegistrar = mock(CyServiceRegistrar.class);
    final EquationCompiler compiler = new EquationCompilerImpl(new EquationParserImpl(serviceRegistrar));
    final Interpreter interpreter = new InterpreterImpl();
    when(serviceRegistrar.getService(CyEventHelper.class)).thenReturn(eh);
    when(serviceRegistrar.getService(CyNetworkNaming.class)).thenReturn(namingUtil);
    when(serviceRegistrar.getService(EquationCompiler.class)).thenReturn(compiler);
    when(serviceRegistrar.getService(Interpreter.class)).thenReturn(interpreter);
    networkTableMgr = new CyNetworkTableManagerImpl();
    networkManager = new CyNetworkManagerImpl(serviceRegistrar);
    mgr = new CyTableManagerImpl(networkTableMgr, networkManager, serviceRegistrar);
    CyTableFactoryImpl tableFactory = new CyTableFactoryImpl(eh, serviceRegistrar);
    CyRootNetworkImpl baseNet = new CyRootNetworkImpl(eh, (CyTableManagerImpl) mgr, networkTableMgr, tableFactory, serviceRegistrar, true, SavePolicy.DO_NOT_SAVE);
    // This is a different subnetwork and not "baseNetwork" in ArrayGraph.
    goodNetwork = baseNet.addSubNetwork();
    globalTable = tableFactory.createTable("test table", CyIdentifiable.SUID, Long.class, true, true);
    networkManager.addNetwork(goodNetwork);
    assertNotNull(globalTable);
    assertNotNull(goodNetwork);
    assertEquals(1, networkManager.getNetworkSet().size());
}