Examples with CyTable org.cytoscape.model.CyTable used on opensource projects

Example 56 with CyTable

use of org.cytoscape.model.CyTable in project cytoscape-impl by cytoscape.

the class DefaultTablesNetwork method createNodeTables.

private void createNodeTables(long suidx, CyTableFactory tableFactory, boolean pubTables, int num, SharedTableFacade sharedNodeTable) {
    final CyTable defTable = tableFactory.createTable(suidx + " default node", CyIdentifiable.SUID, Long.class, false, /* all local tables are private*/
    false, InitialTableSize.SMALL);
    networkTableManager.setTable(networkRef.get(), CyNode.class, CyNetwork.LOCAL_ATTRS, defTable);
    LocalTableFacade localTable = new LocalTableFacade(defTable, sharedNodeTable, eventHelper);
    // Set the privacy of facade tables based on the given flag
    localTable.setPublic(pubTables);
    networkTableManager.setTable(networkRef.get(), CyNode.class, CyNetwork.DEFAULT_ATTRS, localTable);
    if (eventHelper instanceof TableEventHelperFacade)
        ((TableEventHelperFacade) eventHelper).registerFacade(localTable);
    final CyTable hiddenTable = tableFactory.createTable(suidx + " hidden node", CyIdentifiable.SUID, Long.class, false, false, InitialTableSize.SMALL);
    networkTableManager.setTable(networkRef.get(), CyNode.class, CyNetwork.HIDDEN_ATTRS, hiddenTable);
    defTable.createColumn(CyNetwork.NAME, String.class, true);
    defTable.createColumn(CyNetwork.SELECTED, Boolean.class, true, Boolean.FALSE);
}

Example 57 with CyTable

use of org.cytoscape.model.CyTable in project cytoscape-impl by cytoscape.

the class DefaultTablesNetwork method createEdgeTables.

private void createEdgeTables(long suidx, CyTableFactory tableFactory, boolean pubTables, int num, SharedTableFacade sharedEdgeTable) {
    final CyTable defTable = tableFactory.createTable(suidx + " default edge", CyIdentifiable.SUID, Long.class, false, /* all local tables are private*/
    false, InitialTableSize.SMALL);
    networkTableManager.setTable(networkRef.get(), CyEdge.class, CyNetwork.LOCAL_ATTRS, defTable);
    LocalTableFacade localTable = new LocalTableFacade(defTable, sharedEdgeTable, eventHelper);
    // Set the privacy of facade tables based on the given flag
    localTable.setPublic(pubTables);
    networkTableManager.setTable(networkRef.get(), CyEdge.class, CyNetwork.DEFAULT_ATTRS, localTable);
    if (eventHelper instanceof TableEventHelperFacade)
        ((TableEventHelperFacade) eventHelper).registerFacade(localTable);
    final CyTable hiddenTable = tableFactory.createTable(suidx + " hidden edge", CyIdentifiable.SUID, Long.class, false, false, InitialTableSize.SMALL);
    networkTableManager.setTable(networkRef.get(), CyEdge.class, CyNetwork.HIDDEN_ATTRS, hiddenTable);
    defTable.createColumn(CyNetwork.NAME, String.class, true);
    defTable.createColumn(CyNetwork.SELECTED, Boolean.class, true, Boolean.FALSE);
    defTable.createColumn(CyEdge.INTERACTION, String.class, true);
}

Example 58 with CyTable

use of org.cytoscape.model.CyTable in project cytoscape-impl by cytoscape.

the class SharedTableFacade method createListColumn.

public <T> void createListColumn(String columnName, Class<T> listElementType, boolean isImmutable, List<T> defaultValue) {
    checkIfAlreadyExists(columnName);
    logger.debug("adding real List column: '" + columnName + "' to table: " + shared.getTitle());
    shared.createListColumn(columnName, listElementType, isImmutable, defaultValue);
    for (CyTable local : localTables()) {
        logger.debug("adding virtual list column: " + columnName + " to local table: " + local.getTitle());
        local.addVirtualColumn(columnName, columnName, shared, CyIdentifiable.SUID, isImmutable);
    }
}

Example 59 with CyTable

use of org.cytoscape.model.CyTable in project cytoscape-impl by cytoscape.

the class SharedTableFacade method createColumn.

public <T> void createColumn(String columnName, Class<? extends T> type, boolean isImmutable, T defaultValue) {
    checkIfAlreadyExists(columnName);
    logger.debug("adding real column: '" + columnName + "' to table: " + shared.getTitle());
    shared.createColumn(columnName, type, isImmutable, defaultValue);
    for (CyTable local : localTables()) {
        logger.debug("adding virtual column: " + columnName + " to local table: " + local.getTitle());
        local.addVirtualColumn(columnName, columnName, shared, CyIdentifiable.SUID, isImmutable);
    }
}

Example 60 with CyTable

use of org.cytoscape.model.CyTable in project cytoscape-impl by cytoscape.

the class TableEventHelperFacade method fireEvent.

@Override
public <E extends CyEvent<?>> void fireEvent(final E event) {
    final CyEventHelper eventHelper = getEventHelper();
    // always propagate the actual event
    eventHelper.fireEvent(event);
    // make sure the source is something we care about
    Object source = event.getSource();
    if (!(source instanceof CyTable))
        return;
    Reference<LocalTableFacade> reference;
    synchronized (lock) {
        reference = facadeMap.get((CyTable) source);
    }
    if (reference == null)
        return;
    LocalTableFacade facade = reference.get();
    if (facade == null)
        return;
    // create a new event for the facade table based on the actual event
    CyEvent<?> facadeEvent = null;
    if (event instanceof TableTitleChangedEvent) {
        TableTitleChangedEvent e = (TableTitleChangedEvent) event;
        facadeEvent = new TableTitleChangedEvent(facade, e.getOldTitle());
    } else if (event instanceof TablePrivacyChangedEvent) {
        facadeEvent = new TablePrivacyChangedEvent(facade);
    } else if (event instanceof ColumnNameChangedEvent) {
        ColumnNameChangedEvent e = (ColumnNameChangedEvent) event;
        facadeEvent = new ColumnNameChangedEvent(facade, e.getOldColumnName(), e.getNewColumnName());
    } else if (event instanceof ColumnDeletedEvent) {
        ColumnDeletedEvent e = (ColumnDeletedEvent) event;
        facadeEvent = new ColumnDeletedEvent(facade, e.getColumnName());
    } else if (event instanceof ColumnCreatedEvent) {
        ColumnCreatedEvent e = (ColumnCreatedEvent) event;
        facadeEvent = new ColumnCreatedEvent(facade, e.getColumnName());
    }
    // fire the new facade event
    if (facadeEvent != null)
        eventHelper.fireEvent(facadeEvent);
}