Examples with LogicalModel org.hl7.fhir.definitions.model.LogicalModel used on opensource projects

Example 21 with LogicalModel

use of org.hl7.fhir.definitions.model.LogicalModel in project kindling by HL7.

the class Publisher method produceLogicalModel.

private void produceLogicalModel(LogicalModel lm, ImplementationGuideDefn ig) throws Exception {
    String n = lm.getId();
    Map<String, String> examples = new HashMap<String, String>();
    File tmp = Utilities.createTempFile("tmp", ".tmp");
    TerminologyNotesGenerator tgen = new TerminologyNotesGenerator(new FileOutputStream(tmp), page);
    if (lm.hasResource())
        tgen.generate("", lm.getResource().getRoot());
    else
        tgen.generate("", lm.getDefinition());
    tgen.close();
    String tx = TextFile.fileToString(tmp.getAbsolutePath());
    DictHTMLGenerator dgen = new DictHTMLGenerator(new FileOutputStream(tmp), page, "");
    if (lm.hasResource())
        dgen.generate(lm.getResource().getRoot());
    else
        dgen.generate(lm.getDefinition());
    dgen.close();
    String dict = TextFile.fileToString(tmp.getAbsolutePath());
    MappingsGenerator mgen = new MappingsGenerator(page.getDefinitions());
    if (lm.hasResource())
        mgen.generate(lm.getResource());
    else
        mgen.generate(lm.getDefinition());
    String mappings = mgen.getMappings();
    String mappingsList = mgen.getMappingsList();
    SvgGenerator svg = new SvgGenerator(page, "", lm.getLayout(), true, false, page.getVersion());
    String fn = ig.getPrefix() + n;
    if (lm.hasResource())
        svg.generate(lm.getResource(), page.getFolders().dstDir + fn + ".svg", "2");
    else
        svg.generate(lm.getDefinition(), page.getFolders().dstDir + fn + ".svg", "2");
    String prefix = page.getBreadCrumbManager().getIndexPrefixForReference(lm.getId() + ".html");
    SectionTracker st = new SectionTracker(prefix, true);
    st.start("");
    page.getSectionTrackerCache().put(fn, st);
    if (lm.getDefinition() != null) {
        new XmlParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(Utilities.path(page.getFolders().dstDir, ig.getPrefix(), n + ".xml")), lm.getDefinition());
        cloneToXhtml(ig.getPrefix() + n, "Logical Model " + lm.getDefinition().getName(), true, "logical-model", lm.getDefinition().getName(), null, lm.getWg());
        new JsonParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(Utilities.path(page.getFolders().dstDir, ig.getPrefix(), n + ".json")), lm.getDefinition());
        jsonToXhtml(ig.getPrefix() + n, "Logical Model " + lm.getDefinition().getName(), new JsonParser().setOutputStyle(OutputStyle.PRETTY).composeString(lm.getDefinition()), "logical-model", lm.getDefinition().getName(), null, lm.getWg());
        ttlToXhtml(ig.getPrefix() + n, "Logical Model " + lm.getDefinition().getName(), new RdfParser().setOutputStyle(OutputStyle.PRETTY).composeString(lm.getDefinition()), "logical-model", lm.getDefinition().getName(), null, lm.getWg());
    }
    if (lm.getWg() != null && lm.getResource().getWg() == null)
        lm.getResource().setWg(lm.getWg());
    String template = "template-logical";
    String src = TextFile.fileToString(page.getFolders().templateDir + template + ".html");
    Map<String, String> values = new HashMap<String, String>();
    if (lm.hasResource())
        src = insertSectionNumbers(page.processResourceIncludes(n, lm.getResource(), "", "", "", tx, dict, src, mappings, mappingsList, "resource", n + ".html", ig, values, lm.getWg(), examples), st, n + ".html", ig.getLevel(), null);
    else
        src = insertSectionNumbers(new LogicalModelProcessor(n, page, ig, lm.getDefinition().getId(), "logical-model", n + ".html", lm.getDefinition(), tx, dict, examples, ig.getLogicalModels(), page.getDefinitions(), page.getVersion()).process(src), st, n + ".html", ig.getLevel(), null);
    TextFile.stringToFile(src, page.getFolders().dstDir + fn + ".html");
    page.getHTMLChecker().registerFile(fn + ".html", "Base Page for " + n, HTMLLinkChecker.XHTML_TYPE, true);
    src = TextFile.fileToString(page.getFolders().templateDir + "template-logical-definitions.html");
    if (lm.hasResource())
        TextFile.stringToFile(insertSectionNumbers(page.processResourceIncludes(n, lm.getResource(), "", "", "", tx, dict, src, mappings, mappingsList, "res-Detailed Descriptions", n + "-definitions.html", ig, values, lm.getWg(), examples), st, n + "-definitions.html", ig.getLevel(), null), page.getFolders().dstDir + fn + "-definitions.html");
    else
        TextFile.stringToFile(insertSectionNumbers(new LogicalModelProcessor(n, page, ig, lm.getDefinition().getId(), "logical-model", n + ".html", lm.getDefinition(), tx, dict, examples, ig.getLogicalModels(), page.getDefinitions(), page.getVersion()).process(src), st, n + "-definitions.html", ig.getLevel(), null), page.getFolders().dstDir + fn + "-definitions.html");
    page.getHTMLChecker().registerFile(fn + "-definitions.html", "Detailed Descriptions for " + (lm.hasResource() ? lm.getResource().getName() : lm.getDefinition().getName()), HTMLLinkChecker.XHTML_TYPE, true);
    src = TextFile.fileToString(page.getFolders().templateDir + "template-logical-examples.html");
    if (lm.hasResource())
        TextFile.stringToFile(insertSectionNumbers(page.processResourceIncludes(n, lm.getResource(), "", "", "", tx, dict, src, mappings, mappingsList, "resource", n + ".html", ig, values, lm.getWg(), examples), st, n + ".html", ig.getLevel(), null), page.getFolders().dstDir + fn + "-implementations.html");
    else
        TextFile.stringToFile(insertSectionNumbers(new LogicalModelProcessor(n, page, ig, lm.getDefinition().getId(), "logical-model", n + ".html", lm.getDefinition(), tx, dict, examples, ig.getLogicalModels(), page.getDefinitions(), page.getVersion()).process(src), st, n + "-implementations.html", ig.getLevel(), null), page.getFolders().dstDir + fn + "-implementations.html");
    page.getHTMLChecker().registerFile(fn + "-implementations.html", "Implementations for " + (lm.hasResource() ? lm.getResource().getName() : lm.getDefinition().getName()), HTMLLinkChecker.XHTML_TYPE, true);
    src = TextFile.fileToString(page.getFolders().templateDir + "template-logical-mappings.html");
    if (lm.hasResource())
        TextFile.stringToFile(insertSectionNumbers(page.processResourceIncludes(n, lm.getResource(), "", "", "", tx, dict, src, mappings, mappingsList, "res-Mappings", n + "-mappings.html", ig, values, lm.getWg(), examples), st, n + "-mappings.html", ig.getLevel(), null), page.getFolders().dstDir + fn + "-mappings.html");
    else
        TextFile.stringToFile(insertSectionNumbers(new LogicalModelProcessor(n, page, ig, lm.getDefinition().getId(), "logical-model", n + ".html", lm.getDefinition(), tx, dict, examples, ig.getLogicalModels(), page.getDefinitions(), page.getVersion()).process(src), st, n + "-mappings.html", ig.getLevel(), null), page.getFolders().dstDir + fn + "-mappings.html");
    page.getHTMLChecker().registerFile(fn + "-mappings.html", "Formal Mappings for " + n, HTMLLinkChecker.XHTML_TYPE, true);
    src = TextFile.fileToString(page.getFolders().templateDir + "template-logical-analysis.html");
    if (lm.hasResource())
        TextFile.stringToFile(insertSectionNumbers(page.processResourceIncludes(n, lm.getResource(), "", "", "", tx, dict, src, mappings, mappingsList, "res-Analysis", n + "-analysis.html", ig, values, lm.getWg(), examples), st, n + "-analysis.html", ig.getLevel(), null), page.getFolders().dstDir + fn + "-analysis.html");
    else
        TextFile.stringToFile(insertSectionNumbers(new LogicalModelProcessor(n, page, ig, lm.getDefinition().getId(), "logical-model", n + ".html", lm.getDefinition(), tx, dict, examples, ig.getLogicalModels(), page.getDefinitions(), page.getVersion()).process(src), st, n + "-analysis.html", ig.getLevel(), null), page.getFolders().dstDir + fn + "-analysis.html");
    page.getHTMLChecker().registerFile(fn + "-analysis.html", "Analysis for " + n, HTMLLinkChecker.XHTML_TYPE, true);
    tmp.delete();
}

Example 22 with LogicalModel

use of org.hl7.fhir.definitions.model.LogicalModel in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method generateDescription.

private Cell generateDescription(HierarchicalTableGenerator gen, Row row, ElementDefinition definition, ElementDefinition fallback, boolean used, String baseURL, String url, StructureDefinition profile, String corePath, String imagePath, boolean root, boolean logicalModel, boolean allInvariants, ElementDefinition valueDefn, boolean snapshot) throws IOException, FHIRException {
    Cell c = gen.new Cell();
    row.getCells().add(c);
    if (used) {
        if (logicalModel && ToolingExtensions.hasExtension(profile, "http://hl7.org/fhir/StructureDefinition/elementdefinition-namespace")) {
            if (root) {
                c.getPieces().add(gen.new Piece(null, translate("sd.table", "XML Namespace") + ": ", null).addStyle("font-weight:bold"));
                c.getPieces().add(gen.new Piece(null, ToolingExtensions.readStringExtension(profile, "http://hl7.org/fhir/StructureDefinition/elementdefinition-namespace"), null));
            } else if (!root && ToolingExtensions.hasExtension(definition, "http://hl7.org/fhir/StructureDefinition/elementdefinition-namespace") && !ToolingExtensions.readStringExtension(definition, "http://hl7.org/fhir/StructureDefinition/elementdefinition-namespace").equals(ToolingExtensions.readStringExtension(profile, "http://hl7.org/fhir/StructureDefinition/elementdefinition-namespace"))) {
                c.getPieces().add(gen.new Piece(null, translate("sd.table", "XML Namespace") + ": ", null).addStyle("font-weight:bold"));
                c.getPieces().add(gen.new Piece(null, ToolingExtensions.readStringExtension(definition, "http://hl7.org/fhir/StructureDefinition/elementdefinition-namespace"), null));
            }
        }
        if (definition.hasContentReference()) {
            ElementDefinition ed = getElementByName(profile.getSnapshot().getElement(), definition.getContentReference());
            if (ed == null)
                c.getPieces().add(gen.new Piece(null, translate("sd.table", "Unknown reference to %s", definition.getContentReference()), null));
            else
                c.getPieces().add(gen.new Piece("#" + ed.getPath(), translate("sd.table", "See %s", ed.getPath()), null));
        }
        if (definition.getPath().endsWith("url") && definition.hasFixed()) {
            c.getPieces().add(checkForNoChange(definition.getFixed(), gen.new Piece(null, "\"" + buildJson(definition.getFixed()) + "\"", null).addStyle("color: darkgreen")));
        } else {
            if (definition != null && definition.hasShort()) {
                if (!c.getPieces().isEmpty())
                    c.addPiece(gen.new Piece("br"));
                c.addPiece(checkForNoChange(definition.getShortElement(), gen.new Piece(null, gt(definition.getShortElement()), null)));
            } else if (fallback != null && fallback.hasShort()) {
                if (!c.getPieces().isEmpty())
                    c.addPiece(gen.new Piece("br"));
                c.addPiece(checkForNoChange(fallback.getShortElement(), gen.new Piece(null, gt(fallback.getShortElement()), null)));
            }
            if (url != null) {
                if (!c.getPieces().isEmpty())
                    c.addPiece(gen.new Piece("br"));
                String fullUrl = url.startsWith("#") ? baseURL + url : url;
                StructureDefinition ed = context.fetchResource(StructureDefinition.class, url);
                String ref = null;
                String ref2 = null;
                String fixedUrl = null;
                if (ed != null) {
                    String p = ed.getUserString("path");
                    if (p != null) {
                        ref = p.startsWith("http:") || igmode ? p : Utilities.pathURL(corePath, p);
                    }
                    fixedUrl = getFixedUrl(ed);
                    if (fixedUrl != null) {
                        // if its null, we guess that it's not a profiled extension?
                        if (fixedUrl.equals(url))
                            fixedUrl = null;
                        else {
                            StructureDefinition ed2 = context.fetchResource(StructureDefinition.class, fixedUrl);
                            if (ed2 != null) {
                                String p2 = ed2.getUserString("path");
                                if (p2 != null) {
                                    ref2 = p2.startsWith("http:") || igmode ? p2 : Utilities.pathURL(corePath, p2);
                                }
                            }
                        }
                    }
                }
                if (fixedUrl == null) {
                    c.getPieces().add(gen.new Piece(null, translate("sd.table", "URL") + ": ", null).addStyle("font-weight:bold"));
                    c.getPieces().add(gen.new Piece(ref, fullUrl, null));
                } else {
                    // reference to a profile take on the extension show the base URL
                    c.getPieces().add(gen.new Piece(null, translate("sd.table", "URL") + ": ", null).addStyle("font-weight:bold"));
                    c.getPieces().add(gen.new Piece(ref2, fixedUrl, null));
                    c.getPieces().add(gen.new Piece(null, translate("sd.table", " profiled by ") + " ", null).addStyle("font-weight:bold"));
                    c.getPieces().add(gen.new Piece(ref, fullUrl, null));
                }
            }
            if (definition.hasSlicing()) {
                if (!c.getPieces().isEmpty())
                    c.addPiece(gen.new Piece("br"));
                c.getPieces().add(gen.new Piece(null, translate("sd.table", "Slice") + ": ", null).addStyle("font-weight:bold"));
                c.getPieces().add(gen.new Piece(null, describeSlice(definition.getSlicing()), null));
            }
            if (definition != null) {
                ElementDefinitionBindingComponent binding = null;
                if (valueDefn != null && valueDefn.hasBinding() && !valueDefn.getBinding().isEmpty())
                    binding = valueDefn.getBinding();
                else if (definition.hasBinding())
                    binding = definition.getBinding();
                if (binding != null && !binding.isEmpty()) {
                    if (!c.getPieces().isEmpty())
                        c.addPiece(gen.new Piece("br"));
                    BindingResolution br = pkp.resolveBinding(profile, binding, definition.getPath());
                    c.getPieces().add(checkForNoChange(binding, gen.new Piece(null, translate("sd.table", "Binding") + ": ", null).addStyle("font-weight:bold")));
                    c.getPieces().add(checkForNoChange(binding, gen.new Piece(br.url == null ? null : Utilities.isAbsoluteUrl(br.url) || !pkp.prependLinks() ? br.url : corePath + br.url, br.display, null)));
                    if (binding.hasStrength()) {
                        c.getPieces().add(checkForNoChange(binding, gen.new Piece(null, " (", null)));
                        c.getPieces().add(checkForNoChange(binding, gen.new Piece(corePath + "terminologies.html#" + binding.getStrength().toCode(), egt(binding.getStrengthElement()), binding.getStrength().getDefinition())));
                        c.getPieces().add(gen.new Piece(null, ")", null));
                    }
                    if (binding.hasExtension(ToolingExtensions.EXT_MAX_VALUESET)) {
                        br = pkp.resolveBinding(profile, ToolingExtensions.readStringExtension(binding, ToolingExtensions.EXT_MAX_VALUESET), definition.getPath());
                        c.addPiece(gen.new Piece("br"));
                        c.getPieces().add(checkForNoChange(binding, gen.new Piece(corePath + "extension-elementdefinition-maxvalueset.html", translate("sd.table", "Max Binding") + ": ", "Max Value Set Extension").addStyle("font-weight:bold")));
                        c.getPieces().add(checkForNoChange(binding, gen.new Piece(br.url == null ? null : Utilities.isAbsoluteUrl(br.url) || !pkp.prependLinks() ? br.url : corePath + br.url, br.display, null)));
                    }
                    if (binding.hasExtension(ToolingExtensions.EXT_MIN_VALUESET)) {
                        br = pkp.resolveBinding(profile, ToolingExtensions.readStringExtension(binding, ToolingExtensions.EXT_MIN_VALUESET), definition.getPath());
                        c.addPiece(gen.new Piece("br"));
                        c.getPieces().add(checkForNoChange(binding, gen.new Piece(corePath + "extension-elementdefinition-minvalueset.html", translate("sd.table", "Min Binding") + ": ", "Min Value Set Extension").addStyle("font-weight:bold")));
                        c.getPieces().add(checkForNoChange(binding, gen.new Piece(br.url == null ? null : Utilities.isAbsoluteUrl(br.url) || !pkp.prependLinks() ? br.url : corePath + br.url, br.display, null)));
                    }
                }
                for (ElementDefinitionConstraintComponent inv : definition.getConstraint()) {
                    if (!inv.hasSource() || allInvariants) {
                        if (!c.getPieces().isEmpty())
                            c.addPiece(gen.new Piece("br"));
                        c.getPieces().add(checkForNoChange(inv, gen.new Piece(null, inv.getKey() + ": ", null).addStyle("font-weight:bold")));
                        c.getPieces().add(checkForNoChange(inv, gen.new Piece(null, gt(inv.getHumanElement()), null)));
                    }
                }
                if ((definition.hasBase() && definition.getBase().getMax().equals("*")) || (definition.hasMax() && definition.getMax().equals("*"))) {
                    if (c.getPieces().size() > 0)
                        c.addPiece(gen.new Piece("br"));
                    if (definition.hasOrderMeaning()) {
                        c.getPieces().add(gen.new Piece(null, "This repeating element order: " + definition.getOrderMeaning(), null));
                    } else {
                    // don't show this, this it's important: c.getPieces().add(gen.new Piece(null, "This repeating element has no defined order", null));
                    }
                }
                if (definition.hasFixed()) {
                    if (!c.getPieces().isEmpty())
                        c.addPiece(gen.new Piece("br"));
                    c.getPieces().add(checkForNoChange(definition.getFixed(), gen.new Piece(null, translate("sd.table", "Fixed Value") + ": ", null).addStyle("font-weight:bold")));
                    if (!useTableForFixedValues || definition.getFixed().isPrimitive()) {
                        String s = buildJson(definition.getFixed());
                        String link = null;
                        if (Utilities.isAbsoluteUrl(s))
                            link = pkp.getLinkForUrl(corePath, s);
                        c.getPieces().add(checkForNoChange(definition.getFixed(), gen.new Piece(link, s, null).addStyle("color: darkgreen")));
                    } else {
                        c.getPieces().add(checkForNoChange(definition.getFixed(), gen.new Piece(null, "As shown", null).addStyle("color: darkgreen")));
                        genFixedValue(gen, row, definition.getFixed(), snapshot, false, corePath);
                    }
                    if (isCoded(definition.getFixed()) && !hasDescription(definition.getFixed())) {
                        Piece p = describeCoded(gen, definition.getFixed());
                        if (p != null)
                            c.getPieces().add(p);
                    }
                } else if (definition.hasPattern()) {
                    if (!c.getPieces().isEmpty())
                        c.addPiece(gen.new Piece("br"));
                    c.getPieces().add(checkForNoChange(definition.getPattern(), gen.new Piece(null, translate("sd.table", "Required Pattern") + ": ", null).addStyle("font-weight:bold")));
                    if (!useTableForFixedValues || definition.getPattern().isPrimitive())
                        c.getPieces().add(checkForNoChange(definition.getPattern(), gen.new Piece(null, buildJson(definition.getPattern()), null).addStyle("color: darkgreen")));
                    else {
                        c.getPieces().add(checkForNoChange(definition.getPattern(), gen.new Piece(null, "At least the following", null).addStyle("color: darkgreen")));
                        genFixedValue(gen, row, definition.getPattern(), snapshot, true, corePath);
                    }
                } else if (definition.hasExample()) {
                    for (ElementDefinitionExampleComponent ex : definition.getExample()) {
                        if (!c.getPieces().isEmpty())
                            c.addPiece(gen.new Piece("br"));
                        c.getPieces().add(checkForNoChange(ex, gen.new Piece(null, translate("sd.table", "Example") + ("".equals("General") ? "" : " " + ex.getLabel() + "'") + ": ", null).addStyle("font-weight:bold")));
                        c.getPieces().add(checkForNoChange(ex, gen.new Piece(null, buildJson(ex.getValue()), null).addStyle("color: darkgreen")));
                    }
                }
                if (definition.hasMaxLength() && definition.getMaxLength() != 0) {
                    if (!c.getPieces().isEmpty())
                        c.addPiece(gen.new Piece("br"));
                    c.getPieces().add(checkForNoChange(definition.getMaxLengthElement(), gen.new Piece(null, "Max Length: ", null).addStyle("font-weight:bold")));
                    c.getPieces().add(checkForNoChange(definition.getMaxLengthElement(), gen.new Piece(null, Integer.toString(definition.getMaxLength()), null).addStyle("color: darkgreen")));
                }
                if (profile != null) {
                    for (StructureDefinitionMappingComponent md : profile.getMapping()) {
                        if (md.hasExtension(ToolingExtensions.EXT_TABLE_NAME)) {
                            ElementDefinitionMappingComponent map = null;
                            for (ElementDefinitionMappingComponent m : definition.getMapping()) if (m.getIdentity().equals(md.getIdentity()))
                                map = m;
                            if (map != null) {
                                for (int i = 0; i < definition.getMapping().size(); i++) {
                                    c.addPiece(gen.new Piece("br"));
                                    c.getPieces().add(gen.new Piece(null, ToolingExtensions.readStringExtension(md, ToolingExtensions.EXT_TABLE_NAME) + ": " + map.getMap(), null));
                                }
                            }
                        }
                    }
                }
            }
        }
    }
    return c;
}

Example 23 with LogicalModel

use of org.hl7.fhir.definitions.model.LogicalModel in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method genElement.

private Row genElement(String defPath, HierarchicalTableGenerator gen, List<Row> rows, ElementDefinition element, List<ElementDefinition> all, List<StructureDefinition> profiles, boolean showMissing, String profileBaseFileName, Boolean extensions, boolean snapshot, String corePath, String imagePath, boolean root, boolean logicalModel, boolean isConstraintMode, boolean allInvariants, Row slicingRow) throws IOException, FHIRException {
    Row originalRow = slicingRow;
    StructureDefinition profile = profiles == null ? null : profiles.get(profiles.size() - 1);
    String s = tail(element.getPath());
    if (element.hasSliceName())
        s = s + ":" + element.getSliceName();
    Row typesRow = null;
    List<ElementDefinition> children = getChildren(all, element);
    boolean isExtension = (s.equals("extension") || s.equals("modifierExtension"));
    if (!onlyInformationIsMapping(all, element)) {
        Row row = gen.new Row();
        row.setAnchor(element.getPath());
        row.setColor(getRowColor(element, isConstraintMode));
        if (element.hasSlicing())
            row.setLineColor(1);
        else if (element.hasSliceName())
            row.setLineColor(2);
        else
            row.setLineColor(0);
        boolean hasDef = element != null;
        boolean ext = false;
        if (tail(element.getPath()).equals("extension")) {
            if (element.hasType() && element.getType().get(0).hasProfile() && extensionIsComplex(element.getType().get(0).getProfile().get(0).getValue()))
                row.setIcon("icon_extension_complex.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_COMPLEX);
            else
                row.setIcon("icon_extension_simple.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_SIMPLE);
            ext = true;
        } else if (tail(element.getPath()).equals("modifierExtension")) {
            if (element.hasType() && element.getType().get(0).hasProfile() && extensionIsComplex(element.getType().get(0).getProfile().get(0).getValue()))
                row.setIcon("icon_modifier_extension_complex.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_COMPLEX);
            else
                row.setIcon("icon_modifier_extension_simple.png", HierarchicalTableGenerator.TEXT_ICON_EXTENSION_SIMPLE);
        } else if (!hasDef || element.getType().size() == 0)
            row.setIcon("icon_element.gif", HierarchicalTableGenerator.TEXT_ICON_ELEMENT);
        else if (hasDef && element.getType().size() > 1) {
            if (allAreReference(element.getType()))
                row.setIcon("icon_reference.png", HierarchicalTableGenerator.TEXT_ICON_REFERENCE);
            else {
                row.setIcon("icon_choice.gif", HierarchicalTableGenerator.TEXT_ICON_CHOICE);
                typesRow = row;
            }
        } else if (hasDef && element.getType().get(0).getWorkingCode() != null && element.getType().get(0).getWorkingCode().startsWith("@"))
            row.setIcon("icon_reuse.png", HierarchicalTableGenerator.TEXT_ICON_REUSE);
        else if (hasDef && isPrimitive(element.getType().get(0).getWorkingCode()))
            row.setIcon("icon_primitive.png", HierarchicalTableGenerator.TEXT_ICON_PRIMITIVE);
        else if (hasDef && element.getType().get(0).hasTarget())
            row.setIcon("icon_reference.png", HierarchicalTableGenerator.TEXT_ICON_REFERENCE);
        else if (hasDef && isDataType(element.getType().get(0).getWorkingCode()))
            row.setIcon("icon_datatype.gif", HierarchicalTableGenerator.TEXT_ICON_DATATYPE);
        else
            row.setIcon("icon_resource.png", HierarchicalTableGenerator.TEXT_ICON_RESOURCE);
        String ref = defPath == null ? null : defPath + element.getId();
        UnusedTracker used = new UnusedTracker();
        used.used = true;
        if (logicalModel && element.hasRepresentation(PropertyRepresentation.XMLATTR))
            s = "@" + s;
        Cell left = gen.new Cell(null, ref, s, (element.hasSliceName() ? translate("sd.table", "Slice") + " " + element.getSliceName() : "") + (hasDef && element.hasSliceName() ? ": " : "") + (!hasDef ? null : gt(element.getDefinitionElement())), null);
        row.getCells().add(left);
        Cell gc = gen.new Cell();
        row.getCells().add(gc);
        if (element != null && element.getIsModifier())
            checkForNoChange(element.getIsModifierElement(), gc.addStyledText(translate("sd.table", "This element is a modifier element"), "?!", null, null, null, false));
        if (element != null && element.getMustSupport())
            checkForNoChange(element.getMustSupportElement(), gc.addStyledText(translate("sd.table", "This element must be supported"), "S", "white", "red", null, false));
        if (element != null && element.getIsSummary())
            checkForNoChange(element.getIsSummaryElement(), gc.addStyledText(translate("sd.table", "This element is included in summaries"), "\u03A3", null, null, null, false));
        if (element != null && (!element.getConstraint().isEmpty() || !element.getCondition().isEmpty()))
            gc.addStyledText(translate("sd.table", "This element has or is affected by some invariants"), "I", null, null, null, false);
        ExtensionContext extDefn = null;
        if (ext) {
            if (element != null && element.getType().size() == 1 && element.getType().get(0).hasProfile()) {
                String eurl = element.getType().get(0).getProfile().get(0).getValue();
                extDefn = locateExtension(StructureDefinition.class, eurl);
                if (extDefn == null) {
                    genCardinality(gen, element, row, hasDef, used, null);
                    row.getCells().add(gen.new Cell(null, null, "?? " + element.getType().get(0).getProfile(), null, null));
                    generateDescription(gen, row, element, null, used.used, profile.getUrl(), eurl, profile, corePath, imagePath, root, logicalModel, allInvariants, snapshot);
                } else {
                    String name = urltail(eurl);
                    left.getPieces().get(0).setText(name);
                    // left.getPieces().get(0).setReference((String) extDefn.getExtensionStructure().getTag("filename"));
                    left.getPieces().get(0).setHint(translate("sd.table", "Extension URL") + " = " + extDefn.getUrl());
                    genCardinality(gen, element, row, hasDef, used, extDefn.getElement());
                    ElementDefinition valueDefn = extDefn.getExtensionValueDefinition();
                    if (valueDefn != null && !"0".equals(valueDefn.getMax()))
                        genTypes(gen, row, valueDefn, profileBaseFileName, profile, corePath, imagePath);
                    else
                        // if it's complex, we just call it nothing
                        // genTypes(gen, row, extDefn.getSnapshot().getElement().get(0), profileBaseFileName, profile);
                        row.getCells().add(gen.new Cell(null, null, "(" + translate("sd.table", "Complex") + ")", null, null));
                    generateDescription(gen, row, element, extDefn.getElement(), used.used, null, extDefn.getUrl(), profile, corePath, imagePath, root, logicalModel, allInvariants, valueDefn, snapshot);
                }
            } else {
                genCardinality(gen, element, row, hasDef, used, null);
                if ("0".equals(element.getMax()))
                    row.getCells().add(gen.new Cell());
                else
                    genTypes(gen, row, element, profileBaseFileName, profile, corePath, imagePath);
                generateDescription(gen, row, element, null, used.used, null, null, profile, corePath, imagePath, root, logicalModel, allInvariants, snapshot);
            }
        } else {
            genCardinality(gen, element, row, hasDef, used, null);
            if (element.hasSlicing())
                row.getCells().add(gen.new Cell(null, corePath + "profiling.html#slicing", "(Slice Definition)", null, null));
            else if (hasDef && !"0".equals(element.getMax()) && typesRow == null)
                genTypes(gen, row, element, profileBaseFileName, profile, corePath, imagePath);
            else
                row.getCells().add(gen.new Cell());
            generateDescription(gen, row, element, null, used.used, null, null, profile, corePath, imagePath, root, logicalModel, allInvariants, snapshot);
        }
        if (element.hasSlicing()) {
            if (standardExtensionSlicing(element)) {
                // doesn't matter whether we have a type, we're used if we're setting up slicing ... element.hasType() && element.getType().get(0).hasProfile();
                used.used = true;
                // ?
                showMissing = false;
            } else {
                row.setIcon("icon_slice.png", HierarchicalTableGenerator.TEXT_ICON_SLICE);
                slicingRow = row;
                for (Cell cell : row.getCells()) for (Piece p : cell.getPieces()) {
                    p.addStyle("font-style: italic");
                }
            }
        } else if (element.hasSliceName()) {
            row.setIcon("icon_slice_item.png", HierarchicalTableGenerator.TEXT_ICON_SLICE_ITEM);
        }
        if (used.used || showMissing)
            rows.add(row);
        if (!used.used && !element.hasSlicing()) {
            for (Cell cell : row.getCells()) for (Piece p : cell.getPieces()) {
                p.setStyle("text-decoration:line-through");
                p.setReference(null);
            }
        } else {
            if (slicingRow != originalRow && !children.isEmpty()) {
                // we've entered a slice; we're going to create a holder row for the slice children
                Row hrow = gen.new Row();
                hrow.setAnchor(element.getPath());
                hrow.setColor(getRowColor(element, isConstraintMode));
                hrow.setLineColor(1);
                hrow.setIcon("icon_element.gif", HierarchicalTableGenerator.TEXT_ICON_ELEMENT);
                hrow.getCells().add(gen.new Cell(null, null, "(All Slices)", "", null));
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell(null, null, "Content/Rules for all slices", "", null));
                row.getSubRows().add(hrow);
                row = hrow;
            }
            if (typesRow != null && !children.isEmpty()) {
                // we've entered a typing slice; we're going to create a holder row for the all types children
                Row hrow = gen.new Row();
                hrow.setAnchor(element.getPath());
                hrow.setColor(getRowColor(element, isConstraintMode));
                hrow.setLineColor(1);
                hrow.setIcon("icon_element.gif", HierarchicalTableGenerator.TEXT_ICON_ELEMENT);
                hrow.getCells().add(gen.new Cell(null, null, "(All Types)", "", null));
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell());
                hrow.getCells().add(gen.new Cell(null, null, "Content/Rules for all Types", "", null));
                row.getSubRows().add(hrow);
                row = hrow;
            }
            Row currRow = row;
            for (ElementDefinition child : children) {
                if (!child.hasSliceName())
                    currRow = row;
                if (logicalModel || !child.getPath().endsWith(".id") || (child.getPath().endsWith(".id") && (profile != null) && (profile.getDerivation() == TypeDerivationRule.CONSTRAINT)))
                    currRow = genElement(defPath, gen, currRow.getSubRows(), child, all, profiles, showMissing, profileBaseFileName, isExtension, snapshot, corePath, imagePath, false, logicalModel, isConstraintMode, allInvariants, currRow);
            }
        // if (!snapshot && (extensions == null || !extensions))
        // for (ElementDefinition child : children)
        // if (child.getPath().endsWith(".extension") || child.getPath().endsWith(".modifierExtension"))
        // genElement(defPath, gen, row.getSubRows(), child, all, profiles, showMissing, profileBaseFileName, true, false, corePath, imagePath, false, logicalModel, isConstraintMode, allInvariants);
        }
        if (typesRow != null) {
            makeChoiceRows(typesRow.getSubRows(), element, gen, corePath, profileBaseFileName);
        }
    }
    return slicingRow;
}

Example 24 with LogicalModel

use of org.hl7.fhir.definitions.model.LogicalModel in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method genElementCells.

public List<Cell> genElementCells(HierarchicalTableGenerator gen, ElementDefinition element, String profileBaseFileName, boolean snapshot, String corePath, String imagePath, boolean root, boolean logicalModel, boolean allInvariants, StructureDefinition profile, Row typesRow, Row row, boolean hasDef, boolean ext, UnusedTracker used, String ref, String sName, Cell nameCell, boolean mustSupport, boolean allowSubRows, RenderingContext rc) throws IOException {
    List<Cell> res = new ArrayList<>();
    Cell gc = gen.new Cell();
    row.getCells().add(gc);
    res.add(gc);
    if (element != null && element.getIsModifier()) {
        checkForNoChange(element.getIsModifierElement(), gc.addStyledText(translate("sd.table", "This element is a modifier element"), "?!", null, null, null, false));
    }
    if (element != null && element.getMustSupport()) {
        checkForNoChange(element.getMustSupportElement(), gc.addStyledText(translate("sd.table", "This element must be supported"), "S", "white", "red", null, false));
    }
    if (element != null && element.getIsSummary()) {
        checkForNoChange(element.getIsSummaryElement(), gc.addStyledText(translate("sd.table", "This element is included in summaries"), "\u03A3", null, null, null, false));
    }
    if (element != null && (hasNonBaseConstraints(element.getConstraint()) || hasNonBaseConditions(element.getCondition()))) {
        gc.addStyledText(translate("sd.table", "This element has or is affected by some invariants (" + listConstraintsAndConditions(element) + ")"), "I", null, null, null, false);
    }
    ExtensionContext extDefn = null;
    if (ext) {
        if (element != null && element.getType().size() == 1 && element.getType().get(0).hasProfile()) {
            String eurl = element.getType().get(0).getProfile().get(0).getValue();
            extDefn = locateExtension(StructureDefinition.class, eurl);
            if (extDefn == null) {
                res.add(genCardinality(gen, element, row, hasDef, used, null));
                res.add(addCell(row, gen.new Cell(null, null, "?gen-e1? " + element.getType().get(0).getProfile(), null, null)));
                res.add(generateDescription(gen, row, element, (ElementDefinition) element.getUserData(DERIVATION_POINTER), used.used, profile == null ? "" : profile.getUrl(), eurl, profile, corePath, imagePath, root, logicalModel, allInvariants, snapshot, mustSupport, allowSubRows, rc));
            } else {
                String name = urltail(eurl);
                nameCell.getPieces().get(0).setText(name);
                // left.getPieces().get(0).setReference((String) extDefn.getExtensionStructure().getTag("filename"));
                nameCell.getPieces().get(0).setHint(translate("sd.table", "Extension URL") + " = " + extDefn.getUrl());
                res.add(genCardinality(gen, element, row, hasDef, used, extDefn.getElement()));
                ElementDefinition valueDefn = extDefn.getExtensionValueDefinition();
                if (valueDefn != null && !"0".equals(valueDefn.getMax()))
                    res.add(genTypes(gen, row, valueDefn, profileBaseFileName, profile, corePath, imagePath, root, mustSupport));
                else
                    // if it's complex, we just call it nothing
                    // genTypes(gen, row, extDefn.getSnapshot().getElement().get(0), profileBaseFileName, profile);
                    res.add(addCell(row, gen.new Cell(null, null, "(" + translate("sd.table", "Complex") + ")", null, null)));
                res.add(generateDescription(gen, row, element, extDefn.getElement(), used.used, null, extDefn.getUrl(), profile, corePath, imagePath, root, logicalModel, allInvariants, valueDefn, snapshot, mustSupport, allowSubRows, rc));
            }
        } else {
            res.add(genCardinality(gen, element, row, hasDef, used, null));
            if ("0".equals(element.getMax()))
                res.add(addCell(row, gen.new Cell()));
            else
                res.add(genTypes(gen, row, element, profileBaseFileName, profile, corePath, imagePath, root, mustSupport));
            res.add(generateDescription(gen, row, element, (ElementDefinition) element.getUserData(DERIVATION_POINTER), used.used, null, null, profile, corePath, imagePath, root, logicalModel, allInvariants, snapshot, mustSupport, allowSubRows, rc));
        }
    } else {
        res.add(genCardinality(gen, element, row, hasDef, used, null));
        if (hasDef && !"0".equals(element.getMax()) && typesRow == null)
            res.add(genTypes(gen, row, element, profileBaseFileName, profile, corePath, imagePath, root, mustSupport));
        else
            res.add(addCell(row, gen.new Cell()));
        res.add(generateDescription(gen, row, element, (ElementDefinition) element.getUserData(DERIVATION_POINTER), used.used, null, null, profile, corePath, imagePath, root, logicalModel, allInvariants, snapshot, mustSupport, allowSubRows, rc));
    }
    return res;
}

Example 25 with LogicalModel

use of org.hl7.fhir.definitions.model.LogicalModel in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilities method generateTable.

public XhtmlNode generateTable(String defFile, StructureDefinition profile, boolean diff, String imageFolder, boolean inlineGraphics, String profileBaseFileName, boolean snapshot, String corePath, String imagePath, boolean logicalModel, boolean allInvariants, Set<String> outputTracker, boolean active, boolean mustSupport, RenderingContext rc) throws IOException, FHIRException {
    // check it's ok to get rid of one of these
    assert (diff != snapshot);
    HierarchicalTableGenerator gen = new HierarchicalTableGenerator(imageFolder, inlineGraphics, true);
    gen.setTranslator(getTranslator());
    TableModel model = gen.initNormalTable(corePath, false, true, profile.getId() + (diff ? "d" : "s"), active);
    List<ElementDefinition> list = new ArrayList<>();
    if (diff)
        list.addAll(profile.getDifferential().getElement());
    else
        list.addAll(profile.getSnapshot().getElement());
    List<StructureDefinition> profiles = new ArrayList<StructureDefinition>();
    profiles.add(profile);
    if (list.isEmpty()) {
        ElementDefinition root = new ElementDefinition().setPath(profile.getType());
        root.setId(profile.getType());
        list.add(root);
    } else {
        if (list.get(0).getPath().contains(".")) {
            ElementDefinition root = new ElementDefinition().setPath(profile.getType());
            root.setId(profile.getType());
            list.add(0, root);
        }
    }
    if (diff) {
        insertMissingSparseElements(list);
    }
    genElement(defFile == null ? null : defFile + "#", gen, model.getRows(), list.get(0), list, profiles, diff, profileBaseFileName, null, snapshot, corePath, imagePath, true, logicalModel, profile.getDerivation() == TypeDerivationRule.CONSTRAINT && usesMustSupport(list), allInvariants, null, mustSupport, rc);
    try {
        return gen.generate(model, imagePath, 0, outputTracker);
    } catch (org.hl7.fhir.exceptions.FHIRException e) {
        throw new FHIRException(context.formatMessage(I18nConstants.ERROR_GENERATING_TABLE_FOR_PROFILE__, profile.getUrl(), e.getMessage()), e);
    }
}