Examples with CodeType org.hl7.fhir.dstu2.model.CodeType used on opensource projects

Example 11 with CodeType

use of org.hl7.fhir.dstu2.model.CodeType in project kindling by HL7.

the class SourceParser method loadCommonSearchParameters.

private void loadCommonSearchParameters() throws FHIRFormatError, FileNotFoundException, IOException {
    Bundle bnd = (Bundle) new XmlParser().parse(new CSFileInputStream(Utilities.path(srcDir, "searchparameter", "common-search-parameters.xml")));
    for (BundleEntryComponent be : bnd.getEntry()) {
        SearchParameter sp = (SearchParameter) be.getResource();
        CommonSearchParameter csp = new CommonSearchParameter();
        csp.setId(sp.getId());
        csp.setCode(sp.getCode());
        for (CodeType ct : sp.getBase()) {
            csp.getResources().add(ct.asStringValue());
            definitions.getCommonSearchParameters().put(ct.asStringValue() + "::" + sp.getCode(), csp);
        }
    }
}

Example 12 with CodeType

use of org.hl7.fhir.dstu2.model.CodeType in project kindling by HL7.

the class SpreadSheetReloader method parseStatus.

private void parseStatus(DomainResource ed, String value) {
    ed.getExtension().removeIf(ext -> ext.getUrl().equals(BuildExtensions.EXT_FMM_LEVEL));
    ed.getExtension().removeIf(ext -> ext.getUrl().equals(BuildExtensions.EXT_STANDARDS_STATUS));
    ed.getExtension().removeIf(ext -> ext.getUrl().equals(BuildExtensions.EXT_NORMATIVE_VERSION));
    if (!Utilities.noString(value) && value.contains("/")) {
        String[] p = value.split("\\/");
        if (Utilities.noString(p[0].trim())) {
            ed.getExtension().removeIf(ext -> ext.getUrl().equals(BuildExtensions.EXT_FMM_LEVEL));
        } else {
            ed.addExtension(BuildExtensions.EXT_FMM_LEVEL, new IntegerType(p[0]));
        }
        if (p[1].contains(";")) {
            ed.addExtension(BuildExtensions.EXT_STANDARDS_STATUS, new CodeType(p[1].substring(0, p[1].indexOf(";"))));
            ed.addExtension(BuildExtensions.EXT_NORMATIVE_VERSION, new CodeType(p[1].substring(p[1].indexOf("from=") + 5)));
        } else {
            ed.addExtension(BuildExtensions.EXT_STANDARDS_STATUS, new CodeType(p[1]));
        }
    }
    sortExtensions(ed);
}

Example 13 with CodeType

use of org.hl7.fhir.dstu2.model.CodeType in project kindling by HL7.

the class SpreadSheetReloader method parseUml.

private void parseUml(ElementDefinition ed, String value, XSSFSheet bindings) {
    ed.removeExtension(BuildExtensions.EXT_UML_BREAK);
    ed.removeExtension(BuildExtensions.EXT_UML_DIR);
    if (!Utilities.noString(value)) {
        if (value.contains("|")) {
            String[] p = value.split("\\|");
            if (Utilities.noString(p[0].trim())) {
                ed.addExtension(BuildExtensions.EXT_UML_BREAK, new CodeType(p[1].trim()));
            } else {
                ed.addExtension(BuildExtensions.EXT_UML_DIR, new CodeType(p[0].trim()));
                ed.addExtension(BuildExtensions.EXT_UML_BREAK, new CodeType(p[1].trim()));
            }
        } else {
            ed.addExtension(BuildExtensions.EXT_UML_DIR, new CodeType(value));
        }
    }
    sortExtensions(ed);
}

Example 14 with CodeType

use of org.hl7.fhir.dstu2.model.CodeType in project kindling by HL7.

the class SpreadSheetReloader method readSearchParameter.

private void readSearchParameter(XSSFRow row, XSSFRow cols, SearchParameter sp) {
    sp.setType(SearchParamType.fromCode(getValue(row, cols, CN_TYPE)));
    sp.setExpression(getValue(row, cols, CN_EXPRESSION));
    sp.setDescription(getValue(row, cols, CN_DESCRIPTION));
    sp.setXpath(getValue(row, cols, CN_X_PATH));
    sp.getTarget().clear();
    for (String s : splitValue(row, cols, CN_TARGET_TYPES, "\\|")) {
        sp.getTarget().add(new CodeType(s));
    }
    readExt(sp, row, cols, CN_PATH, BuildExtensions.EXT_PATH, ExtensionType.String);
    readExt(sp, row, cols, CN_COMMITTEE_NOTES, BuildExtensions.EXT_COMMITTEE_NOTES, ExtensionType.String);
}

Example 15 with CodeType

use of org.hl7.fhir.dstu2.model.CodeType in project kindling by HL7.

the class Regenerator method generateCP.

private void generateCP(String root, ResourceDefn r, Profile p) throws IOException {
    ImplementationGuide ig = new ImplementationGuide();
    ig.setId(r.getName() + "-" + p.getCategory());
    ig.setTitle(p.getTitle());
    ig.setStatus(PublicationStatus.ACTIVE);
    ig.setDate(new Date(r.getTimestamp()));
    for (String s : p.getMetadata().keySet()) {
        List<String> vl = p.getMetadata().get(s);
        for (String v : vl) {
            if (!Utilities.noString(v)) {
                switch(s) {
                    // case "id": ig.setId(v); break;
                    case "name":
                        ig.setName(v);
                        break;
                    case "author.name":
                        ig.setPublisher(v);
                        break;
                    case "code":
                        ig.addExtension(BuildExtensions.EXT_CODE, new CodeType(v));
                        break;
                    case "fmm":
                        ig.addExtension(ToolingExtensions.EXT_FMM_LEVEL, new CodeType(v));
                        break;
                    case "description":
                        ig.setDescription(v);
                        break;
                    case "status":
                        ig.setStatus(PublicationStatus.fromCode(v));
                        break;
                    case "publication.status":
                        break;
                    case "version":
                        ig.setVersion(v);
                        break;
                    case "display":
                        ig.setTitle(v);
                        break;
                    case "workgroup":
                        ig.addExtension(ToolingExtensions.EXT_WORKGROUP, new CodeType(v));
                        break;
                    case "date":
                        ig.getDateElement().setValueAsString(v);
                        break;
                    case "Experimental":
                        ig.setExperimental(Utilities.existsInList(v.toLowerCase(), "y", "yes", "1", "true"));
                        break;
                    default:
                        if (s.startsWith("fmm-") || Utilities.existsInList(s, "extension.uri", "author.reference", "published.structure", "notes", "introduction") || s.startsWith("!")) {
                        // ignore these
                        } else if (s.startsWith("summary-")) {
                            String n = s.substring(8);
                            for (ConstraintStructure cs : p.getProfiles()) {
                                if (n.equals(cs.getTitle()) || n.equals(cs.getId())) {
                                    cs.setSummary(v);
                                }
                            }
                        } else {
                            System.out.println("Unknown metadata item: " + s + "=" + v);
                        }
                }
            }
        }
    }
    if (!Utilities.noString(p.getIntroduction())) {
        ig.addExtension(BuildExtensions.EXT_INTRODUCTION, new StringType(p.getIntroduction()));
    }
    if (!Utilities.noString(p.getNotes())) {
        ig.addExtension(BuildExtensions.EXT_NOTES, new StringType(p.getNotes()));
    }
    for (ConstraintStructure cs : p.getProfiles()) {
        CanonicalResource cr = generateProfile(root, r, p, cs);
        ImplementationGuideDefinitionResourceComponent res = ig.getDefinition().addResource();
        res.getReference().setReference(cr.fhirType() + "/" + cr.getId());
    }
    for (StructureDefinition cs : p.getExtensions()) {
        CanonicalResource cr = generateExtension(root, r, p, cs.copy());
        ImplementationGuideDefinitionResourceComponent res = ig.getDefinition().addResource();
        res.getReference().setReference(cr.fhirType() + "/" + cr.getId());
    }
    for (SearchParameter cs : p.getSearchParameters()) {
        CanonicalResource cr = generateSearchParameter(root, r, p, cs);
        ImplementationGuideDefinitionResourceComponent res = ig.getDefinition().addResource();
        res.getReference().setReference(cr.fhirType() + "/" + cr.getId());
    }
    for (Example cs : p.getExamples()) {
        ImplementationGuideDefinitionResourceComponent res = ig.getDefinition().addResource();
        generateExample(root, r, p, cs, res);
    }
    File fn = new File(Utilities.path(root, ig.fhirType().toLowerCase() + "-" + ig.getId() + ".gen.xml"));
    new XmlParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(fn), ig);
    fn.setLastModified(r.getTimestamp());
}