Examples with ConstraintStructure org.hl7.fhir.definitions.model.ConstraintStructure used on opensource projects

Example 1 with ConstraintStructure

use of org.hl7.fhir.definitions.model.ConstraintStructure in project kindling by HL7.

the class Publisher method produceProfile.

private void produceProfile(ResourceDefn resource, Profile pack, ConstraintStructure profile, SectionTracker st, String intro, String notes, String prefix, ImplementationGuideDefn ig) throws Exception {
    File tmp = Utilities.createTempFile("tmp", ".tmp");
    String title = profile.getId();
    int level = (ig == null || ig.isCore()) ? 0 : 1;
    // you have to validate a profile, because it has to be merged with it's
    // base resource to fill out all the missing bits
    // validateProfile(profile);
    ByteArrayOutputStream bs = new ByteArrayOutputStream();
    XmlSpecGenerator gen = new XmlSpecGenerator(bs, title + "-definitions.html", "", page, ig.isCore() ? "" : "../");
    gen.generate(profile.getResource());
    gen.close();
    String xml = new String(bs.toByteArray());
    bs = new ByteArrayOutputStream();
    JsonSpecGenerator genJ = new JsonSpecGenerator(bs, title + "-definitions.html", "", page, ig.isCore() ? "" : "../", page.getVersion().toCode());
    genJ.generate(profile.getResource());
    genJ.close();
    String json = new String(bs.toByteArray());
    XmlParser comp = new XmlParser();
    FileOutputStream s = new FileOutputStream(page.getFolders().dstDir + prefix + title + ".profile.xml");
    comp.setOutputStyle(OutputStyle.PRETTY).compose(s, profile.getResource());
    s.close();
    Utilities.copyFile(new CSFile(page.getFolders().dstDir + prefix + title + ".profile.xml"), new CSFile(page.getFolders().dstDir + "examples" + File.separator + title + ".profile.xml"));
    JsonParser jcomp = new JsonParser();
    s = new FileOutputStream(page.getFolders().dstDir + prefix + title + ".profile.json");
    jcomp.setOutputStyle(OutputStyle.PRETTY).compose(s, profile.getResource());
    s.close();
    // String shex = new ShExGenerator(page.getWorkerContext()).generate(HTMLLinkPolicy.NONE, profile.getResource());
    // TextFile.stringToFile(shex, Utilities.changeFileExt(page.getFolders().dstDir + prefix +title + ".profile.shex", ".shex"));
    // shexToXhtml(prefix +title + ".profile", "ShEx statement for " + prefix +title, shex, "profile-instance:type:" + title, "Type");
    TerminologyNotesGenerator tgen = new TerminologyNotesGenerator(new FileOutputStream(tmp), page);
    tgen.generate(level == 0 ? "" : "../", profile);
    tgen.close();
    String tx = TextFile.fileToString(tmp.getAbsolutePath());
    String src = TextFile.fileToString(page.getFolders().templateDir + "template-profile.html");
    src = page.processProfileIncludes(profile.getId(), profile.getId(), pack, profile, xml, json, tx, src, title + ".html", (resource == null ? profile.getResource().getType() : resource.getName()) + "/" + pack.getId() + "/" + profile.getId(), intro, notes, ig, false, false);
    if (st != null)
        src = insertSectionNumbers(src, st, title + ".html", level, null);
    else if (ig != null && !ig.isCore()) {
        src = addSectionNumbers(title + ".html", title, src, null, 1, null, ig);
        st = page.getSectionTrackerCache().get(ig.getCode() + "::" + title);
    }
    page.getHTMLChecker().registerFile(prefix + title + ".html", "StructureDefinition " + profile.getResource().getName(), HTMLLinkChecker.XHTML_TYPE, false);
    TextFile.stringToFile(src, page.getFolders().dstDir + prefix + title + ".html");
    new ProfileUtilities(page.getWorkerContext(), page.getValidationErrors(), page).generateSchematrons(new FileOutputStream(page.getFolders().dstDir + prefix + title + ".sch"), profile.getResource());
    if (pack.getExamples().size() > 0) {
        src = TextFile.fileToString(page.getFolders().templateDir + "template-profile-examples.html");
        src = page.processProfileIncludes(profile.getId(), profile.getId(), pack, profile, xml, json, tx, src, title + ".html", (resource == null ? profile.getResource().getType() : resource.getName()) + "/" + pack.getId() + "/" + profile.getId(), intro, notes, ig, false, false);
        page.getHTMLChecker().registerFile(prefix + title + "-examples.html", "Examples for StructureDefinition " + profile.getResource().getName(), HTMLLinkChecker.XHTML_TYPE, true);
        TextFile.stringToFile(src, page.getFolders().dstDir + prefix + title + "-examples.html");
    }
    src = TextFile.fileToString(page.getFolders().templateDir + "template-profile-definitions.html");
    src = page.processProfileIncludes(profile.getId(), profile.getId(), pack, profile, xml, json, tx, src, title + ".html", (resource == null ? profile.getResource().getType() : resource.getName()) + "/" + pack.getId() + "/" + profile.getId(), intro, notes, ig, false, false);
    if (st != null)
        src = insertSectionNumbers(src, st, title + "-definitions.html", level, null);
    page.getHTMLChecker().registerFile(prefix + title + "-definitions.html", "Definitions for StructureDefinition " + profile.getResource().getName(), HTMLLinkChecker.XHTML_TYPE, true);
    TextFile.stringToFile(src, page.getFolders().dstDir + prefix + title + "-definitions.html");
    src = TextFile.fileToString(page.getFolders().templateDir + "template-profile-mappings.html");
    src = page.processProfileIncludes(profile.getId(), profile.getId(), pack, profile, xml, json, tx, src, title + ".html", (resource == null ? profile.getResource().getType() : resource.getName()) + "/" + pack.getId() + "/" + profile.getId(), intro, notes, ig, false, false);
    if (st != null)
        src = insertSectionNumbers(src, st, title + "-mappings.html", level, null);
    page.getHTMLChecker().registerFile(prefix + title + "-mappings.html", "Mappings for StructureDefinition " + profile.getResource().getName(), HTMLLinkChecker.XHTML_TYPE, true);
    TextFile.stringToFile(src, page.getFolders().dstDir + prefix + title + "-mappings.html");
    try {
        processQuestionnaire(resource, profile.getResource(), st, false, prefix, ig);
    } catch (Exception e) {
        e.printStackTrace();
        page.log("Questionnaire Generation Failed: " + e.getMessage(), LogMessageType.Error);
    }
    new ReviewSpreadsheetGenerator().generate(page.getFolders().dstDir + prefix + Utilities.changeFileExt((String) profile.getResource().getUserData("filename"), "-review.xls"), "Health Level Seven International", page.getGenDate(), profile.getResource(), page);
    // xml to xhtml of xml
    // first pass is to strip the xsi: stuff. seems to need double
    // processing in order to delete namespace crap
    DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance();
    factory.setNamespaceAware(true);
    DocumentBuilder builder = factory.newDocumentBuilder();
    Document xdoc = builder.parse(new CSFileInputStream(page.getFolders().dstDir + prefix + title + ".profile.xml"));
    XmlGenerator xmlgen = new XmlGenerator();
    xmlgen.generate(xdoc.getDocumentElement(), tmp, "http://hl7.org/fhir", xdoc.getDocumentElement().getLocalName());
    // reload it now
    builder = factory.newDocumentBuilder();
    xdoc = builder.parse(new CSFileInputStream(tmp.getAbsolutePath()));
    XhtmlGenerator xhtml = new XhtmlGenerator(new ExampleAdorner(page.getDefinitions(), page.genlevel(level)));
    ByteArrayOutputStream b = new ByteArrayOutputStream();
    xhtml.generate(xdoc, b, "StructureDefinition", profile.getTitle(), 0, true, title + ".profile.xml.html");
    String html = TextFile.fileToString(page.getFolders().templateDir + "template-profile-example-xml.html").replace("<%example%>", b.toString());
    html = page.processProfileIncludes(title + ".profile.xml.html", profile.getId(), pack, profile, "", "", "", html, title + ".html", (resource == null ? profile.getResource().getType() : resource.getName()) + "/" + pack.getId() + "/" + profile.getId(), intro, notes, ig, false, hasNarrative(xdoc));
    TextFile.stringToFile(html, page.getFolders().dstDir + prefix + title + ".profile.xml.html");
    page.getHTMLChecker().registerFile(prefix + title + ".profile.xml.html", "StructureDefinition", HTMLLinkChecker.XHTML_TYPE, false);
    String n = prefix + title + ".profile";
    json = resource2Json(profile.getResource());
    json = "<div class=\"example\">\r\n<p>" + Utilities.escapeXml("StructureDefinition for " + profile.getResource().getDescription()) + "</p>\r\n<p><a href=\"" + title + ".profile.json\">Raw JSON</a></p>\r\n<pre class=\"json\">\r\n" + Utilities.escapeXml(json) + "\r\n</pre>\r\n</div>\r\n";
    html = TextFile.fileToString(page.getFolders().templateDir + "template-profile-example-json.html").replace("<%example%>", json);
    html = page.processProfileIncludes(title + ".profile.json.html", profile.getId(), pack, profile, "", "", "", html, title + ".html", (resource == null ? profile.getResource().getType() : resource.getName()) + "/" + pack.getId() + "/" + profile.getId(), intro, notes, ig, false, false);
    TextFile.stringToFile(html, page.getFolders().dstDir + prefix + title + ".profile.json.html");
    // page.getEpub().registerFile(n + ".json.html", description, EPubManager.XHTML_TYPE);
    page.getHTMLChecker().registerExternal(n + ".json.html");
    tmp.delete();
}

Example 2 with ConstraintStructure

use of org.hl7.fhir.definitions.model.ConstraintStructure in project kindling by HL7.

the class Publisher method processProfiles.

@SuppressWarnings("unchecked")
private void processProfiles() throws Exception {
    page.log(" ...process profiles (base)", LogMessageType.Process);
    // first, for each type and resource, we build it's master profile
    for (DefinedCode t : page.getDefinitions().getPrimitives().values()) {
        if (t instanceof PrimitiveType)
            genPrimitiveTypeProfile((PrimitiveType) t);
        else
            genPrimitiveTypeProfile((DefinedStringPattern) t);
    }
    genXhtmlProfile();
    for (TypeDefn t : page.getDefinitions().getTypes().values()) genTypeProfile(t);
    for (TypeDefn t : page.getDefinitions().getInfrastructure().values()) genTypeProfile(t);
    page.log(" ...process profiles (resources)", LogMessageType.Process);
    for (ResourceDefn r : page.getDefinitions().getBaseResources().values()) {
        r.setConformancePack(makeConformancePack(r));
        r.setProfile(new ProfileGenerator(page.getDefinitions(), page.getWorkerContext(), page, page.getGenDate(), page.getVersion(), dataElements, fpUsages, page.getFolders().rootDir, page.getUml(), page.getRc()).generate(r.getConformancePack(), r, "core", false));
        if (page.getProfiles().has(r.getProfile().getUrl()))
            throw new Exception("Duplicate Profile URL " + r.getProfile().getUrl());
        page.getProfiles().see(r.getProfile(), page.packageInfo());
        ResourceTableGenerator rtg = new ResourceTableGenerator(page.getFolders().dstDir, page, null, true, page.getVersion());
        r.getProfile().getText().setDiv(new XhtmlNode(NodeType.Element, "div"));
        r.getProfile().getText().getDiv().getChildNodes().add(rtg.generate(r, "", false));
    }
    for (String rn : page.getDefinitions().sortedResourceNames()) {
        ResourceDefn r = page.getDefinitions().getResourceByName(rn);
        r.setConformancePack(makeConformancePack(r));
        r.setProfile(new ProfileGenerator(page.getDefinitions(), page.getWorkerContext(), page, page.getGenDate(), page.getVersion(), dataElements, fpUsages, page.getFolders().rootDir, page.getUml(), page.getRc()).generate(r.getConformancePack(), r, "core", false));
        if (page.getProfiles().has(r.getProfile().getUrl()))
            throw new Exception("Duplicate Profile URL " + r.getProfile().getUrl());
        page.getProfiles().see(r.getProfile(), page.packageInfo());
        ResourceTableGenerator rtg = new ResourceTableGenerator(page.getFolders().dstDir, page, null, true, page.getVersion());
        r.getProfile().getText().setDiv(new XhtmlNode(NodeType.Element, "div"));
        r.getProfile().getText().getDiv().getChildNodes().add(rtg.generate(r, "", false));
    }
    for (ResourceDefn r : page.getDefinitions().getResourceTemplates().values()) {
        r.setConformancePack(makeConformancePack(r));
        r.setProfile(new ProfileGenerator(page.getDefinitions(), page.getWorkerContext(), page, page.getGenDate(), page.getVersion(), dataElements, fpUsages, page.getFolders().rootDir, page.getUml(), page.getRc()).generate(r.getConformancePack(), r, "core", true));
        ResourceTableGenerator rtg = new ResourceTableGenerator(page.getFolders().dstDir, page, null, true, page.getVersion());
        r.getProfile().getText().setDiv(new XhtmlNode(NodeType.Element, "div"));
        r.getProfile().getText().getDiv().getChildNodes().add(rtg.generate(r, "", true));
        if (page.getProfiles().has(r.getProfile().getUrl()))
            throw new Exception("Duplicate Profile URL " + r.getProfile().getUrl());
        page.getProfiles().see(r.getProfile(), page.packageInfo());
    }
    for (ProfiledType pt : page.getDefinitions().getConstraints().values()) {
        genProfiledTypeProfile(pt);
    }
    page.log(" ...process profiles (extensions)", LogMessageType.Process);
    for (StructureDefinition ex : page.getWorkerContext().getExtensionDefinitions()) processExtension(ex);
    for (ResourceDefn r : page.getDefinitions().getResources().values()) {
        // boolean logged = false;
        for (Profile ap : r.getConformancePackages()) {
            // logged = true;
            for (ConstraintStructure p : ap.getProfiles()) processProfile(ap, p, ap.getId(), r);
        }
    }
    page.log(" ...process profiles (packs)", LogMessageType.Process);
    // we have profiles scoped by resources, and stand alone profiles
    for (Profile ap : page.getDefinitions().getPackList()) {
        // page.log(" ...  pack "+ap.getId(), LogMessageType.Process);
        for (ConstraintStructure p : ap.getProfiles()) processProfile(ap, p, ap.getId(), null);
    }
    page.log(" ...process logical models", LogMessageType.Process);
    for (ImplementationGuideDefn ig : page.getDefinitions().getSortedIgs()) {
        for (LogicalModel lm : ig.getLogicalModels()) {
            page.log(" ...process logical model " + lm.getId(), LogMessageType.Process);
            if (lm.getDefinition() == null)
                lm.setDefinition(new ProfileGenerator(page.getDefinitions(), page.getWorkerContext(), page, page.getGenDate(), page.getVersion(), dataElements, fpUsages, page.getFolders().rootDir, page.getUml(), page.getRc()).generateLogicalModel(ig, lm.getResource()));
        }
    }
    // now, validate the profiles
    for (Profile ap : page.getDefinitions().getPackList()) for (ConstraintStructure p : ap.getProfiles()) validateProfile(p);
    for (ResourceDefn r : page.getDefinitions().getResources().values()) for (Profile ap : r.getConformancePackages()) for (ConstraintStructure p : ap.getProfiles()) validateProfile(p);
    page.log(" ...Check FHIR Path Expressions", LogMessageType.Process);
    StringBuilder b = new StringBuilder();
    FHIRPathEngine fp = new FHIRPathEngine(page.getWorkerContext());
    fp.setHostServices(page.getExpressionResolver());
    for (FHIRPathUsage p : fpUsages) {
        checkExpression(b, fp, p);
    }
    TextFile.stringToFile(b.toString(), Utilities.path(page.getFolders().dstDir, "fhirpaths.txt"));
    checkAllOk();
}

Example 3 with ConstraintStructure

use of org.hl7.fhir.definitions.model.ConstraintStructure in project kindling by HL7.

the class PageProcessor method profileDictionaryLink.

private String profileDictionaryLink(ConstraintStructure profile) {
    String uri = ToolingExtensions.readStringExtension(profile.getResource(), "http://hl7.org/fhir/StructureDefinition/datadictionary");
    if (Utilities.noString(uri))
        return "<!-- no uri -->";
    Dictionary dict = definitions.getDictionaries().get(uri);
    if (dict == null)
        return "<p>This profile specifies that the value of the " + profile.getResource().getSnapshot().getElement().get(0).getPath() + " resource must be a valid Observation as defined in the data dictionary (Unknown? - " + uri + ").</p>";
    else
        return "<p>This profile specifies that the value of the " + profile.getResource().getSnapshot().getElement().get(0).getPath() + " resource must be a valid Observation as defined in the data dictionary <a href=\"" + uri + ".html\">" + dict.getName() + "</a>.</p>";
}

Example 4 with ConstraintStructure

use of org.hl7.fhir.definitions.model.ConstraintStructure in project kindling by HL7.

the class PageProcessor method processProfileIncludes.

public String processProfileIncludes(String filename, String fileid, Profile pack, ConstraintStructure profile, String xml, String json, String tx, String src, String master, String path, String intro, String notes, ImplementationGuideDefn ig, boolean isDict, boolean hasNarrative) throws Exception {
    String workingTitle = null;
    int level = (ig == null || ig.isCore()) ? 0 : 1;
    while (src.contains("<%") || src.contains("[%")) {
        int i1 = src.indexOf("<%");
        int i2 = src.indexOf("%>");
        if (i1 == -1) {
            i1 = src.indexOf("[%");
            i2 = src.indexOf("%]");
        }
        String s1 = src.substring(0, i1);
        String s2 = src.substring(i1 + 2, i2).trim();
        String s3 = src.substring(i2 + 2);
        String[] com = s2.split(" ");
        if (com[0].equals("profileheader"))
            src = s1 + profileHeader(fileid, com.length > 1 ? com[1] : "", hasExamples(pack)) + s3;
        else if (com[0].equals("file")) {
            if (new File(folders.templateDir + com[1] + ".html").exists()) {
                src = s1 + TextFile.fileToString(folders.templateDir + com[1] + ".html") + s3;
            } else {
                src = s1 + TextFile.fileToString(folders.srcDir + com[1] + ".html") + s3;
            }
        } else if (com[0].equals("settitle")) {
            workingTitle = s2.substring(9).replace("{", "<%").replace("}", "%>");
            src = s1 + s3;
        } else if (com.length != 1)
            throw new Exception("Instruction <%" + s2 + "%> not understood parsing resource " + filename);
        else if (com[0].equals("pageheader"))
            src = s1 + pageHeader(pack.metadata("name")) + s3;
        else if (com[0].equals("level"))
            src = s1 + genlevel(level) + s3;
        else if (com[0].equals("newheader"))
            src = s1 + TextFile.fileToString(folders.srcDir + "newheader.html") + s3;
        else if (com[0].equals("newheader1"))
            src = s1 + TextFile.fileToString(folders.srcDir + "newheader1.html") + s3;
        else if (com[0].equals("footer"))
            src = s1 + TextFile.fileToString(folders.srcDir + "footer.html") + s3;
        else if (com[0].equals("newfooter"))
            src = s1 + TextFile.fileToString(folders.srcDir + "newfooter.html") + s3;
        else if (com[0].equals("footer1"))
            src = s1 + TextFile.fileToString(folders.srcDir + "footer1.html") + s3;
        else if (com[0].equals("footer2"))
            src = s1 + TextFile.fileToString(folders.srcDir + "footer2.html") + s3;
        else if (com[0].equals("footer3"))
            src = s1 + TextFile.fileToString(folders.srcDir + "footer3.html") + s3;
        else if (com[0].equals("title"))
            src = s1 + (workingTitle == null ? Utilities.escapeXml("StructureDefinition: " + profile.getTitle()) : workingTitle) + s3;
        else if (com[0].equals("xtitle"))
            src = s1 + (workingTitle == null ? Utilities.escapeXml("StructureDefinition: " + profile.getTitle()) : Utilities.escapeXml(workingTitle)) + s3;
        else if (com[0].equals("profiletitle"))
            src = s1 + Utilities.escapeXml(pack.metadata("name")) + s3;
        else if (com[0].equals("filetitle"))
            src = s1 + (filename.contains(".") ? filename.substring(0, filename.lastIndexOf(".")) : filename) + s3;
        else if (com[0].equals("name"))
            src = s1 + filename + s3;
        else if (com[0].equals("date")) {
            if (!Utilities.noString(pack.metadata("date"))) {
                Date d = new SimpleDateFormat("yyyy-MM-dd").parse(pack.metadata("date"));
                src = s1 + Config.DATE_FORMAT().format(d) + s3;
            } else
                src = s1 + "[no date]" + s3;
        } else if (com[0].equals("version"))
            src = s1 + ini.getStringProperty("FHIR", "version") + s3;
        else if (com[0].equals("gendate"))
            src = s1 + Config.DATE_FORMAT().format(new Date()) + s3;
        else if (com[0].equals("definition"))
            src = s1 + Utilities.escapeXml(pack.metadata("description")) + s3;
        else if (com[0].equals("status"))
            src = s1 + describeStatus(pack.metadata("status")) + s3;
        else if (com[0].equals("author"))
            src = s1 + Utilities.escapeXml(pack.metadata("author.name")) + s3;
        else if (com[0].equals("xml"))
            src = s1 + xml + s3;
        else if (com[0].equals("json"))
            src = s1 + json + s3;
        else if (com[0].equals("profiledesc")) {
            src = s1 + Utilities.escapeXml(profile.getResource().getDescription()) + s3;
        } else if (com[0].equals("tx"))
            src = s1 + tx + s3;
        else if (com[0].equals("inv"))
            src = s1 + genProfileConstraints(profile.getResource()) + s3;
        else if (com[0].equals("plural"))
            src = s1 + Utilities.pluralizeMe(filename) + s3;
        else if (com[0].equals("notes"))
            src = s1 + "todo" + /*Utilities.fileToString(folders.srcDir + filename+File.separatorChar+filename+".html")*/
            s3;
        else if (com[0].equals("dictionary"))
            src = s1 + "todo" + s3;
        else if (com[0].equals("breadcrumb"))
            src = s1 + breadCrumbManager.make(filename) + s3;
        else if (com[0].equals("navlist"))
            src = s1 + breadCrumbManager.navlist(filename, genlevel(level)) + s3;
        else if (com[0].equals("breadcrumblist"))
            src = s1 + ((ig == null || ig.isCore()) ? breadCrumbManager.makelist(filename, "profile:" + path, genlevel(0), profile.getResource().getName()) : ig.makeList(filename, "profile:" + path, genlevel(level), profile.getResource().getName())) + s3;
        else if (com[0].equals("year"))
            src = s1 + new SimpleDateFormat("yyyy").format(new Date()) + s3;
        else if (com[0].equals("buildId"))
            src = s1 + buildId + s3;
        else if (com[0].equals("level"))
            src = s1 + genlevel(0) + s3;
        else if (com[0].equals("pub-type"))
            src = s1 + publicationType + s3;
        else if (com[0].equals("pub-notice"))
            src = s1 + publicationNotice + s3;
        else if (com[0].equals("profileurl"))
            src = s1 + profile.getResource().getUrl() + s3;
        else if (com[0].equals("baseURL"))
            src = s1 + Utilities.URLEncode(baseURL) + s3;
        else if (com[0].equals("baseURLn"))
            src = s1 + Utilities.appendForwardSlash(baseURL) + s3;
        else if (com[0].equals("base-link"))
            src = s1 + baseLink(profile.getResource(), genlevel(level)) + s3;
        else if (com[0].equals("profile-structure-table-diff"))
            src = s1 + generateProfileStructureTable(profile, true, filename, pack.getId(), genlevel(level)) + s3;
        else if (com[0].equals("profile-structure-table"))
            src = s1 + generateProfileStructureTable(profile, false, filename, pack.getId(), genlevel(level)) + s3;
        else if (com[0].equals("maponthispage"))
            src = s1 + mapOnPageProfile(profile.getResource()) + s3;
        else if (com[0].equals("mappings"))
            src = s1 + mappingsProfile(profile.getResource()) + s3;
        else if (com[0].equals("definitions"))
            src = s1 + definitionsProfile(profile.getResource(), genlevel(level)) + s3;
        else if (com[0].equals("profile.review"))
            src = s1 + profileReviewLink(profile) + s3;
        else if (com[0].equals("profile.datadictionary"))
            src = s1 + profileDictionaryLink(profile) + s3;
        else if (com[0].equals("profile.tx"))
            src = s1 + getTerminologyNotes(profile.getResource(), level) + s3;
        else if (com[0].equals("profile.inv"))
            src = s1 + getInvariantList(profile.getResource()) + s3;
        else if (com[0].equals("draft-note"))
            src = s1 + getDraftNote(pack, genlevel(level)) + s3;
        else if (com[0].equals("pagepath"))
            src = s1 + filename + s3;
        else if (com[0].equals("rellink")) {
            if (!filename.contains(".html"))
                src = s1 + filename + ".html" + s3;
            else
                src = s1 + filename + s3;
        } else if (com[0].equals("schematron"))
            src = s1 + (isDict ? "<i>None</i>" : "<a href=\"" + filename + ".sch\">Schematron</a>") + s3;
        else if (com[0].equals("summary"))
            src = s1 + generateHumanSummary(profile.getResource(), genlevel(level)) + s3;
        else if (com[0].equals("profile-examples"))
            src = s1 + generateProfileExamples(pack, profile) + s3;
        else if (com[0].equals("profile-extensions-table"))
            src = s1 + "<p><i>Todo</i></p>" + s3;
        else if (com[0].equals("definitionsonthispage"))
            src = s1 + "<p><i>Todo</i></p>" + s3;
        else if (com[0].equals("profile.intro"))
            src = s1 + genProfileDoco(pack, intro) + s3;
        else if (com[0].equals("profile.notes"))
            src = s1 + genProfileDoco(pack, notes) + s3;
        else if (com[0].equals("search-footer"))
            src = s1 + searchFooter(level) + s3;
        else if (com[0].equals("search-header"))
            src = s1 + searchHeader(level) + s3;
        else if (com[0].startsWith("!"))
            src = s1 + s3;
        else if (com[0].equals("wg")) {
            String wg = profile.getWg().getCode();
            if (Utilities.noString(wg))
                pack.getWg();
            if (Utilities.noString(wg) && profile.getDefn() != null)
                wg = profile.getDefn().getWg().getCode();
            if (wg == null || !definitions.getWorkgroups().containsKey(wg))
                src = s1 + "(No assigned work group) (" + wg + ") (4)" + s3;
            else
                src = s1 + "<a _target=\"blank\" href=\"" + definitions.getWorkgroups().get(wg).getUrl() + "\">" + definitions.getWorkgroups().get(wg).getName() + "</a> Work Group" + s3;
        } else if (com[0].equals("fmm-style")) {
            String fmm = ToolingExtensions.readStringExtension(profile.getResource(), ToolingExtensions.EXT_FMM_LEVEL);
            StandardsStatus ss = ToolingExtensions.getStandardsStatus(profile.getResource());
            src = s1 + fmmBarColorStyle(ss, fmm) + s3;
        } else if (com[0].equals("fmm")) {
            String fmm = profile.getFmm();
            if (Utilities.noString(fmm))
                fmm = pack.getFmmLevel();
            src = s1 + getFmmFromlevel(genlevel(level), fmm) + s3;
        } else if (com[0].equals("profile-context"))
            src = s1 + getProfileContext(pack.getCandidateResource(), genlevel(level)) + s3;
        else if (com[0].equals("sstatus")) {
            StandardsStatus ss = ToolingExtensions.getStandardsStatus(profile.getResource());
            if (ss == null)
                ss = StandardsStatus.INFORMATIVE;
            if (ss == StandardsStatus.NORMATIVE && ToolingExtensions.hasExtension(profile.getResource(), ToolingExtensions.EXT_NORMATIVE_VERSION))
                src = s1 + "<a href=\"" + genlevel(level) + "versions.html#std-process\">" + ss.toDisplay() + "</a> (from v" + ToolingExtensions.readStringExtension(profile.getResource(), ToolingExtensions.EXT_NORMATIVE_VERSION) + ")" + s3;
            else
                src = s1 + "<a href=\"" + genlevel(level) + "versions.html#std-process\">" + ss.toDisplay() + "</a>" + s3;
        } else if (com[0].equals("past-narrative-link")) {
            if (hasNarrative)
                src = s1 + s3;
            else
                src = s1 + "<p><a href=\"#DomainResource.text.div-end\">Jump past Narrative</a></p>" + s3;
        } else if (com[0].equals("resurl")) {
            if (Utilities.noString(pack.metadata("id")))
                src = s1 + s3;
            else
                src = s1 + "The id of this profile is " + pack.metadata("id") + s3;
        } else if (com[0].equals("res-type-count")) {
            src = s1 + definitions.getResources().size() + s3;
        } else if (macros.containsKey(com[0])) {
            src = s1 + macros.get(com[0]) + s3;
        } else
            throw new Exception("Instruction <%" + s2 + "%> not understood parsing resource " + filename);
    }
    return src;
}

Example 5 with ConstraintStructure

use of org.hl7.fhir.definitions.model.ConstraintStructure in project kindling by HL7.

the class PageProcessor method produceStructureDefinitionExamples.

private String produceStructureDefinitionExamples(ResourceDefn resource) throws Exception {
    StringBuilder s = new StringBuilder();
    s.append("<div id=\"tabs\">\r\n");
    s.append("<ul>\r\n");
    s.append("  <li><a href=\"#tabs-1\">Base Types</a></li>\r\n");
    s.append("  <li><a href=\"#tabs-2\">Resources</a></li>\r\n");
    s.append("  <li><a href=\"#tabs-3\">Constraints</a></li>\r\n");
    s.append("  <li><a href=\"#tabs-4\">Extensions</a></li>\r\n");
    s.append("  <li><a href=\"#tabs-5\">Examples</a></li>\r\n");
    s.append("</ul>\r\n");
    s.append("<div id=\"tabs-1\">\r\n");
    // base types
    s.append("<table class=\"list\">\r\n");
    genStructureExampleCategory(s, "Abstract Types", "3");
    genStructureExample(s, definitions.getElementLink(), "element.profile", "element", "Element");
    genStructureExample(s, definitions.getBackboneLink(), "backboneelement.profile", "backboneelement", "BackBoneElement");
    genStructureExample(s, "resource.html", "resource.profile", "resource", "Resource");
    genStructureExample(s, "domainresource.html", "domainresource.profile", "domainresource", "DomainResource");
    genStructureExampleCategory(s, "Primitive Types", "3");
    List<String> names = new ArrayList<String>();
    names.addAll(definitions.getPrimitives().keySet());
    Collections.sort(names);
    for (String n : names) {
        DefinedCode dc = definitions.getPrimitives().get(n);
        genStructureExample(s, "datatypes.html#" + dc.getCode(), dc.getCode().toLowerCase() + ".profile", dc.getCode().toLowerCase(), dc.getCode());
    }
    genStructureExampleCategory(s, "Data Types", "3");
    names.clear();
    names.addAll(definitions.getTypes().keySet());
    names.addAll(definitions.getInfrastructure().keySet());
    Collections.sort(names);
    for (String n : names) {
        org.hl7.fhir.definitions.model.TypeDefn t = definitions.getTypes().get(n);
        if (t == null)
            t = definitions.getInfrastructure().get(n);
        genStructureExample(s, getLinkFor("", t.getName()), t.getName().toLowerCase() + ".profile", t.getName().toLowerCase(), t.getName());
    }
    s.append("</table>\r\n");
    s.append("</div>\r\n");
    s.append("<div id=\"tabs-2\">\r\n");
    s.append("<table class=\"list\">\r\n");
    genStructureExampleCategory(s, "Resources", "3");
    for (String n : definitions.sortedResourceNames()) {
        ResourceDefn r = definitions.getResources().get(n);
        genStructureExample(s, r.getName().toLowerCase() + ".html", r.getName().toLowerCase() + ".profile", r.getName().toLowerCase(), r.getName());
    }
    s.append("</table>\r\n");
    s.append("</div>\r\n");
    s.append("<div id=\"tabs-3\">\r\n");
    s.append("<table class=\"list\">\r\n");
    Map<String, ConstraintStructure> constraints = new HashMap<String, ConstraintStructure>();
    for (Profile pp : definitions.getPackList()) {
        for (ConstraintStructure p : pp.getProfiles()) constraints.put(p.getId(), p);
    }
    for (String rn : definitions.sortedResourceNames()) for (Profile ap : definitions.getResourceByName(rn).getConformancePackages()) for (ConstraintStructure p : ap.getProfiles()) constraints.put(p.getId(), p);
    names.clear();
    names.addAll(constraints.keySet());
    Collections.sort(names);
    for (ImplementationGuideDefn ig : definitions.getSortedIgs()) {
        boolean started = false;
        for (String n : names) {
            ConstraintStructure p = constraints.get(n);
            if (ig == p.getUsage()) {
                if (!started) {
                    started = true;
                    genStructureExampleCategory(s, ig.getName(), "3");
                }
                String prefix = ig.isCore() ? "" : ig.getCode() + "/";
                genStructureExample(s, prefix + p.getId().toLowerCase() + ".html", prefix + p.getId().toLowerCase() + ".profile", p.getId().toLowerCase(), p.getTitle());
            }
        }
    }
    s.append("</table>\r\n");
    s.append("</div>\r\n");
    s.append("<div id=\"tabs-4\">\r\n");
    s.append("<table class=\"list\">\r\n");
    names.clear();
    for (StructureDefinition sd : workerContext.getExtensionDefinitions()) names.add(sd.getUrl());
    Collections.sort(names);
    for (ImplementationGuideDefn ig : definitions.getSortedIgs()) {
        boolean started = false;
        for (String n : names) {
            StructureDefinition ed = workerContext.fetchResource(StructureDefinition.class, n);
            if (ig.getCode().equals(ToolResourceUtilities.getUsage(ed))) {
                if (!started) {
                    started = true;
                    genStructureExampleCategory(s, ig.getName(), "3");
                }
                String prefix = ig.isCore() ? "" : ig.getCode() + "/";
                genStructureExample(s, prefix + "extension-" + ed.getId().toLowerCase() + ".html", prefix + "extension-" + ed.getId().toLowerCase(), ed.getId().toLowerCase(), ed.getUrl().startsWith("http://hl7.org/fhir/StructureDefinition/") ? ed.getUrl().substring(40) : ed.getUrl(), ed.getName());
            }
        }
    }
    s.append("</table>\r\n");
    s.append("</div>\r\n");
    s.append("<div id=\"tabs-5\">\r\n");
    s.append("<table class=\"list\">\r\n");
    for (Example e : resource.getExamples()) {
        if (e.isRegistered() && Utilities.noString(e.getIg()))
            produceExampleListEntry(s, e, null, null);
    }
    for (Profile p : resource.getConformancePackages()) {
        for (Example e : p.getExamples()) {
            produceExampleListEntry(s, e, p, null);
        }
    }
    for (Profile p : definitions.getPackList()) {
        ImplementationGuideDefn ig = definitions.getIgs().get(p.getCategory());
        for (Example e : p.getExamples()) {
            String rn = e.getResourceName();
            if (Utilities.noString(rn))
                rn = e.getXml().getDocumentElement().getNodeName();
            if (rn.equals(resource.getName()))
                produceExampleListEntry(s, e, p, ig);
        }
    }
    for (ImplementationGuideDefn ig : definitions.getSortedIgs()) {
        if (ig.getIg() != null) {
            for (ImplementationGuideDefinitionResourceComponent res : ig.getIg().getDefinition().getResource()) {
                Example e = (Example) res.getUserData(ToolResourceUtilities.NAME_RES_EXAMPLE);
                if (res.hasExample() && e != null && e.getResourceName().equals(resource.getName()))
                    produceExampleListEntry(s, res, ig);
            }
        }
    }
    s.append("</table>\r\n");
    s.append("</div>\r\n");
    s.append("</div>\r\n");
    s.append("\r\n");
    s.append("<script src=\"external/jquery/jquery.js\"> </script>\r\n");
    s.append("<script src=\"jquery-ui.min.js\"> </script>\r\n");
    s.append("<script>\r\n");
    s.append("try {\r\n");
    s.append("  var currentTabIndex = sessionStorage.getItem('fhir-sdelist-tab-index');\r\n");
    s.append("}\r\n");
    s.append("catch(exception){\r\n");
    s.append("}\r\n");
    s.append("\r\n");
    s.append("if (!currentTabIndex)\r\n");
    s.append("  currentTabIndex = '0';\r\n");
    s.append("  \r\n");
    s.append("$( '#tabs' ).tabs({\r\n");
    s.append("         active: currentTabIndex,\r\n");
    s.append("         activate: function( event, ui ) {\r\n");
    s.append("             var active = $('.selector').tabs('option', 'active');\r\n");
    s.append("             currentTabIndex = ui.newTab.index();\r\n");
    s.append("             document.activeElement.blur();\r\n");
    s.append("             try {\r\n");
    s.append("               sessionStorage.setItem('fhir-sdelist-tab-index', currentTabIndex);\r\n");
    s.append("             }\r\n");
    s.append("             catch(exception){\r\n");
    s.append("             }\r\n");
    s.append("         }\r\n");
    s.append("     });\r\n");
    s.append("</script>\r\n");
    s.append("\r\n");
    return s.toString();
}