Examples with IntegerType org.hl7.fhir.r4.model.IntegerType used on opensource projects

Example 71 with IntegerType

use of org.hl7.fhir.r4.model.IntegerType in project cqf-ruler by DBCG.

the class MultitenantServerR4IT method testCreateAndReadInTenantA.

@Test
public void testCreateAndReadInTenantA() {
    // Create tenant A
    ourClientTenantInterceptor.setTenantId("DEFAULT");
    ourClient.operation().onServer().named(ProviderConstants.PARTITION_MANAGEMENT_CREATE_PARTITION).withParameter(Parameters.class, ProviderConstants.PARTITION_MANAGEMENT_PARTITION_ID, new IntegerType(1)).andParameter(ProviderConstants.PARTITION_MANAGEMENT_PARTITION_NAME, new CodeType("TENANT-A")).execute();
    ourClientTenantInterceptor.setTenantId("TENANT-A");
    Patient pt = new Patient();
    pt.addName().setFamily("Family A");
    ourClient.create().resource(pt).execute().getId();
    Bundle searchResult = ourClient.search().forResource(Patient.class).returnBundle(Bundle.class).cacheControl(new CacheControlDirective().setNoCache(true)).execute();
    assertEquals(1, searchResult.getEntry().size());
    Patient pt2 = (Patient) searchResult.getEntry().get(0).getResource();
    assertEquals("Family A", pt2.getName().get(0).getFamily());
}

Example 72 with IntegerType

use of org.hl7.fhir.r4.model.IntegerType in project cqf-ruler by DBCG.

the class MultitenantServerR4IT method testCreateAndReadInTenantB.

@Test
public void testCreateAndReadInTenantB() {
    // Create tenant A
    ourClientTenantInterceptor.setTenantId("DEFAULT");
    ourClient.operation().onServer().named(ProviderConstants.PARTITION_MANAGEMENT_CREATE_PARTITION).withParameter(Parameters.class, ProviderConstants.PARTITION_MANAGEMENT_PARTITION_ID, new IntegerType(2)).andParameter(ProviderConstants.PARTITION_MANAGEMENT_PARTITION_NAME, new CodeType("TENANT-B")).execute();
    ourClientTenantInterceptor.setTenantId("TENANT-B");
    Patient pt = new Patient();
    pt.addName().setFamily("Family B");
    ourClient.create().resource(pt).execute().getId();
    Bundle searchResult = ourClient.search().forResource(Patient.class).returnBundle(Bundle.class).cacheControl(new CacheControlDirective().setNoCache(true)).execute();
    assertEquals(1, searchResult.getEntry().size());
    Patient pt2 = (Patient) searchResult.getEntry().get(0).getResource();
    assertEquals("Family B", pt2.getName().get(0).getFamily());
}

Example 73 with IntegerType

use of org.hl7.fhir.r4.model.IntegerType in project quality-measure-and-cohort-service by Alvearie.

the class R4ParameterDefinitionWithDefaultToCohortParameterConverter method toCohortParameter.

public static Parameter toCohortParameter(Extension extension) {
    Parameter parameter;
    Type extensionValue = extension.getValue();
    if (extensionValue instanceof Base64BinaryType) {
        parameter = new StringParameter(((Base64BinaryType) extensionValue).asStringValue());
    } else if (extensionValue instanceof BooleanType) {
        parameter = new BooleanParameter(((BooleanType) extensionValue).booleanValue());
    } else if (extensionValue instanceof DateType) {
        parameter = new DateParameter(((DateType) extensionValue).asStringValue());
    } else if (extensionValue instanceof DateTimeType) {
        parameter = convertDateTimeType((DateTimeType) extensionValue);
    } else if (extensionValue instanceof DecimalType) {
        parameter = new DecimalParameter(((DecimalType) extensionValue).getValueAsString());
    } else if (extensionValue instanceof InstantType) {
        parameter = new DatetimeParameter(((InstantType) extensionValue).getValueAsString());
    } else if (extensionValue instanceof IntegerType) {
        parameter = new IntegerParameter(((IntegerType) extensionValue).getValue());
    } else if (extensionValue instanceof StringType) {
        parameter = new StringParameter(((StringType) extensionValue).getValue());
    } else if (extensionValue instanceof TimeType) {
        parameter = new TimeParameter(((TimeType) extensionValue).asStringValue());
    } else if (extensionValue instanceof UriType) {
        parameter = new StringParameter(((UriType) extensionValue).getValue());
    } else if (extensionValue instanceof Coding) {
        parameter = convertCoding((Coding) extensionValue);
    } else if (extensionValue instanceof CodeableConcept) {
        parameter = convertCodeableConcept((CodeableConcept) extensionValue);
    } else if (extensionValue instanceof Period) {
        Period castValue = (Period) extensionValue;
        parameter = new IntervalParameter(convertDateTimeType(castValue.getStartElement()), true, convertDateTimeType(castValue.getEndElement()), true);
    } else if (extensionValue instanceof Quantity) {
        parameter = convertQuantity((Quantity) extensionValue);
    } else if (extensionValue instanceof Range) {
        Range castValue = (Range) extensionValue;
        parameter = new IntervalParameter(convertQuantity(castValue.getLow()), true, convertQuantity(castValue.getHigh()), true);
    } else if (extensionValue instanceof Ratio) {
        Ratio castValue = (Ratio) extensionValue;
        parameter = new RatioParameter().setDenominator(convertQuantity(castValue.getDenominator())).setNumerator(convertQuantity(castValue.getNumerator()));
    } else {
        throw new UnsupportedFhirTypeException(extensionValue);
    }
    return parameter;
}

Example 74 with IntegerType

use of org.hl7.fhir.r4.model.IntegerType in project quality-measure-and-cohort-service by Alvearie.

the class MeasureEvaluatorTest method measure_report_generated___java_overrides_overwrite_measure_params.

@Test
public void measure_report_generated___java_overrides_overwrite_measure_params() throws Exception {
    CapabilityStatement metadata = getCapabilityStatement();
    mockFhirResourceRetrieval("/metadata?_format=json", metadata);
    Patient patient = getPatient("123", AdministrativeGender.MALE, "1970-10-10");
    mockFhirResourceRetrieval(patient);
    Library library = mockLibraryRetrieval("TestDummyPopulations", DEFAULT_VERSION, "cql/fhir-measure/test-dummy-populations.xml", ELM_MIME_TYPE);
    Measure measure = getCohortMeasure("CohortMeasureName", library, INITIAL_POPULATION);
    String duplicateParamName = "duplicateParam";
    int fhirMeasureIntValue = 10;
    int javaParameterIntValue = 99;
    measure.addExtension(createParameterExtension(duplicateParamName, new IntegerType(fhirMeasureIntValue)));
    mockFhirResourceRetrieval(measure);
    Map<String, Parameter> parameterMap = new HashMap<>();
    parameterMap.put(duplicateParamName, new IntegerParameter(javaParameterIntValue));
    MeasureReport report = evaluator.evaluatePatientMeasure(measure.getId(), patient.getId(), parameterMap);
    assertNotNull(report);
    // Make sure report only contained one entry for the duplicate parameter
    List<Type> filteredReportParams = report.getExtension().stream().filter(x -> x.getUrl().equals(MEASURE_PARAMETER_VALUE_URL)).map(x -> (ParameterDefinition) x.getValue()).filter(x -> x.getName().equals(duplicateParamName)).map(x -> x.getExtensionByUrl(PARAMETER_VALUE_URL).getValue()).collect(Collectors.toList());
    assertEquals(1, filteredReportParams.size());
    // Sanity check input parameter values were different before checking for correct value
    assertNotEquals(fhirMeasureIntValue, javaParameterIntValue);
    assertEquals(javaParameterIntValue, ((IntegerType) filteredReportParams.get(0)).getValue().intValue());
}

Example 75 with IntegerType

use of org.hl7.fhir.r4.model.IntegerType in project quality-measure-and-cohort-service by Alvearie.

the class MeasureSupplementalDataEvaluationTest method testProcessAccumulators_multiplePatients.

@Test
public void testProcessAccumulators_multiplePatients() {
    Map<String, Map<String, Integer>> initialAccumulators = new HashMap<>();
    Map<String, Integer> initialMale = new HashMap<>();
    initialMale.put(MALE_CODE, 1);
    initialAccumulators.put(MeasureSupplementalDataEvaluation.SDE_SEX, initialMale);
    Map<String, Map<String, Integer>> sdeAccumulators = getSexSDEAccumulatorsWithInitialAccumulators(initialAccumulators);
    MeasureReport report = new MeasureReport();
    MeasureSupplementalDataEvaluation.processAccumulators(report, sdeAccumulators, false, new ArrayList<>());
    assertNotNull(report);
    // EvaluatedResource should contain a reference to an observation record created for supplemental data
    assertEquals(1, report.getEvaluatedResource().size());
    // The observation record mentioned previously should exist within the contained resources of the measure report
    assertEquals(1, report.getContained().size());
    assertTrue(report.getContained().get(0) instanceof Observation);
    Observation obs = (Observation) report.getContained().get(0);
    // For a multiple patients, the code of the observation should be the supplemental data text
    assertEquals(MALE_CODE, obs.getCode().getCoding().get(0).getCode());
    // For a multiple patients, the value of the observation should be the result of the appropriate define
    assertTrue(obs.getValue() instanceof IntegerType);
    assertEquals("2", ((IntegerType) obs.getValue()).getValueAsString());
    // Within the observation, there should be 1 extension, with two further nested extensions
    Extension obsExt = obs.getExtensionByUrl(MeasureSupplementalDataEvaluation.CQF_MEASUREINFO_URL);
    assertNotNull(obsExt);
    assertEquals(2, obsExt.getExtension().size());
    Extension measureNestedExt = obsExt.getExtensionByUrl(MeasureSupplementalDataEvaluation.MEASURE);
    assertTrue(measureNestedExt.getValue() instanceof CanonicalType);
    assertEquals(MeasureSupplementalDataEvaluation.CQFMEASURES_URL + report.getMeasure(), ((CanonicalType) measureNestedExt.getValue()).asStringValue());
    Extension populationNestedExt = obsExt.getExtensionByUrl(MeasureSupplementalDataEvaluation.POPULATION_ID);
    assertEquals(MeasureSupplementalDataEvaluation.SDE_SEX, ((StringType) populationNestedExt.getValue()).asStringValue());
}