use of org.hl7.fhir.r4b.model.SearchParameter in project org.hl7.fhir.core by hapifhir.
the class IntegrityChecker method checkSP.
private void checkSP() throws IOException {
List<SearchParameter> list = new ArrayList<>();
for (String sdn : npm.listResources("SearchParameter")) {
InputStream s = npm.load(sdn);
SearchParameter sp = (SearchParameter) new JsonParser().parse(s);
list.add(sp);
}
msg("Loaded " + list.size() + " resources");
Map<String, SearchParameterNode> map = new HashMap<>();
for (SearchParameter sp : list) {
for (CodeType c : sp.getBase()) {
String s = c.primitiveValue();
if (!map.containsKey(s)) {
map.put(s, new SearchParameterNode(s));
}
addNode(sp, sp.getBase().size() == 1, map.get(s));
}
}
for (SearchParameterNode node : sort(map.values())) {
dump(node);
}
}
use of org.hl7.fhir.r4b.model.SearchParameter in project org.hl7.fhir.core by hapifhir.
the class SimpleWorkerContext method loadFromPackageInt.
public int loadFromPackageInt(NpmPackage pi, IContextResourceLoader loader, String... types) throws FileNotFoundException, IOException, FHIRException {
int t = 0;
if (progress) {
System.out.println("Load Package " + pi.name() + "#" + pi.version());
}
if (loadedPackages.contains(pi.id() + "#" + pi.version())) {
return 0;
}
loadedPackages.add(pi.id() + "#" + pi.version());
if ((types == null || types.length == 0) && loader != null) {
types = loader.getTypes();
}
if (VersionUtilities.isR2Ver(pi.fhirVersion()) || !pi.canLazyLoad()) {
// can't lazy load R2 because of valueset/codesystem implementation
if (types.length == 0) {
types = new String[] { "StructureDefinition", "ValueSet", "SearchParameter", "OperationDefinition", "Questionnaire", "ConceptMap", "StructureMap", "NamingSystem" };
}
for (String s : pi.listResources(types)) {
try {
loadDefinitionItem(s, pi.load("package", s), loader, null, new PackageVersion(pi.id(), pi.version()));
t++;
} catch (Exception e) {
throw new FHIRException(formatMessage(I18nConstants.ERROR_READING__FROM_PACKAGE__, s, pi.name(), pi.version(), e.getMessage()), e);
}
}
} else {
if (types.length == 0) {
types = new String[] { "StructureDefinition", "ValueSet", "CodeSystem", "SearchParameter", "OperationDefinition", "Questionnaire", "ConceptMap", "StructureMap", "NamingSystem", "Measures" };
}
for (PackageResourceInformation pri : pi.listIndexedResources(types)) {
try {
registerResourceFromPackage(new PackageResourceLoader(pri, loader), new PackageVersion(pi.id(), pi.version()));
t++;
} catch (FHIRException e) {
throw new FHIRException(formatMessage(I18nConstants.ERROR_READING__FROM_PACKAGE__, pri.getFilename(), pi.name(), pi.version(), e.getMessage()), e);
}
}
}
for (String s : pi.list("other")) {
binaries.put(s, TextFile.streamToBytes(pi.load("other", s)));
}
if (version == null) {
version = pi.version();
}
return t;
}
use of org.hl7.fhir.r4b.model.SearchParameter in project org.hl7.fhir.core by hapifhir.
the class BaseWorkerContext method fetchResourceWithException.
@SuppressWarnings("unchecked")
public <T extends Resource> T fetchResourceWithException(String cls, String uri, CanonicalResource source) throws FHIRException {
if (uri == null) {
return null;
}
if ("StructureDefinition".equals(cls)) {
uri = ProfileUtilities.sdNs(uri, getOverrideVersionNs());
}
synchronized (lock) {
String version = null;
if (uri.contains("|")) {
version = uri.substring(uri.lastIndexOf("|") + 1);
uri = uri.substring(0, uri.lastIndexOf("|"));
}
if (uri.contains("#")) {
uri = uri.substring(0, uri.indexOf("#"));
}
if (cls == null || "Resource".equals(cls)) {
if (structures.has(uri)) {
return (T) structures.get(uri, version);
}
if (guides.has(uri)) {
return (T) guides.get(uri, version);
}
if (capstmts.has(uri)) {
return (T) capstmts.get(uri, version);
}
if (measures.has(uri)) {
return (T) measures.get(uri, version);
}
if (libraries.has(uri)) {
return (T) libraries.get(uri, version);
}
if (valueSets.has(uri)) {
return (T) valueSets.get(uri, version);
}
if (codeSystems.has(uri)) {
return (T) codeSystems.get(uri, version);
}
if (operations.has(uri)) {
return (T) operations.get(uri, version);
}
if (searchParameters.has(uri)) {
return (T) searchParameters.get(uri, version);
}
if (plans.has(uri)) {
return (T) plans.get(uri, version);
}
if (maps.has(uri)) {
return (T) maps.get(uri, version);
}
if (transforms.has(uri)) {
return (T) transforms.get(uri, version);
}
if (questionnaires.has(uri)) {
return (T) questionnaires.get(uri, version);
}
for (Map<String, ResourceProxy> rt : allResourcesById.values()) {
for (ResourceProxy r : rt.values()) {
if (uri.equals(r.getUrl())) {
return (T) r.getResource();
}
}
}
} else if ("ImplementationGuide".equals(cls)) {
return (T) guides.get(uri, version);
} else if ("CapabilityStatement".equals(cls)) {
return (T) capstmts.get(uri, version);
} else if ("Measure".equals(cls)) {
return (T) measures.get(uri, version);
} else if ("Library".equals(cls)) {
return (T) libraries.get(uri, version);
} else if ("StructureDefinition".equals(cls)) {
return (T) structures.get(uri, version);
} else if ("StructureMap".equals(cls)) {
return (T) transforms.get(uri, version);
} else if ("ValueSet".equals(cls)) {
return (T) valueSets.get(uri, version);
} else if ("CodeSystem".equals(cls)) {
return (T) codeSystems.get(uri, version);
} else if ("ConceptMap".equals(cls)) {
return (T) maps.get(uri, version);
} else if ("PlanDefinition".equals(cls)) {
return (T) plans.get(uri, version);
} else if ("OperationDefinition".equals(cls)) {
OperationDefinition od = operations.get(uri, version);
return (T) od;
} else if ("Questionnaire.class".equals(cls)) {
return (T) questionnaires.get(uri, version);
} else if ("SearchParameter.class".equals(cls)) {
SearchParameter res = searchParameters.get(uri, version);
return (T) res;
}
if ("CodeSystem".equals(cls) && codeSystems.has(uri)) {
return (T) codeSystems.get(uri, version);
}
if ("ValueSet".equals(cls) && valueSets.has(uri)) {
return (T) valueSets.get(uri, version);
}
if ("Questionnaire".equals(cls)) {
return (T) questionnaires.get(uri, version);
}
if (cls == null) {
if (uri.matches(Constants.URI_REGEX) && !uri.contains("ValueSet")) {
return null;
}
// it might be a special URL.
if (Utilities.isAbsoluteUrl(uri) || uri.startsWith("ValueSet/")) {
// findTxValueSet(uri);
Resource res = null;
if (res != null) {
return (T) res;
}
}
return null;
}
if (supportedCodeSystems.contains(uri)) {
return null;
}
throw new FHIRException(formatMessage(I18nConstants.NOT_DONE_YET_CANT_FETCH_, uri));
}
}
use of org.hl7.fhir.r4b.model.SearchParameter in project org.hl7.fhir.core by hapifhir.
the class IntegrityChecker method checkSP.
private void checkSP() throws IOException {
List<SearchParameter> list = new ArrayList<>();
for (String sdn : npm.listResources("SearchParameter")) {
InputStream s = npm.load(sdn);
SearchParameter sp = (SearchParameter) new JsonParser().parse(s);
list.add(sp);
}
msg("Loaded " + list.size() + " resources");
Map<String, SearchParameterNode> map = new HashMap<>();
for (SearchParameter sp : list) {
for (CodeType c : sp.getBase()) {
String s = c.primitiveValue();
if (!map.containsKey(s)) {
map.put(s, new SearchParameterNode(s));
}
addNode(sp, sp.getBase().size() == 1, map.get(s));
}
}
for (SearchParameterNode node : sort(map.values())) {
dump(node);
}
}
use of org.hl7.fhir.r4b.model.SearchParameter in project org.hl7.fhir.core by hapifhir.
the class GraphQLSchemaGenerator method generateConnectionAccess.
private void generateConnectionAccess(BufferedWriter writer, List<SearchParameter> parameters, String name) throws IOException {
writer.write("type " + name + "ConnectionType {\r\n");
writer.write(" " + name + "Conection(");
param(writer, "_filter", "String", false, false);
for (SearchParameter sp : parameters) param(writer, sp.getName().replace("-", "_"), getGqlname(sp.getType().toCode()), true, true);
param(writer, "_sort", "String", false, true);
param(writer, "_count", "Int", false, true);
param(writer, "_cursor", "String", false, true);
writer.write("): " + name + "Connection\r\n");
writer.write("}\r\n");
writer.write("\r\n");
writer.write("type " + name + "Connection {\r\n");
writer.write(" count: Int\r\n");
writer.write(" offset: Int\r\n");
writer.write(" pagesize: Int\r\n");
writer.write(" first: ID\r\n");
writer.write(" previous: ID\r\n");
writer.write(" next: ID\r\n");
writer.write(" last: ID\r\n");
writer.write(" edges: [" + name + "Edge]\r\n");
writer.write("}\r\n");
writer.write("\r\n");
writer.write("type " + name + "Edge {\r\n");
writer.write(" mode: String\r\n");
writer.write(" score: Float\r\n");
writer.write(" resource: " + name + "\r\n");
writer.write("}\r\n");
writer.write("\r\n");
}
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