Examples with ProfileUtilities org.hl7.fhir.r5.conformance.ProfileUtilities used on opensource projects

Example 21 with ProfileUtilities

use of org.hl7.fhir.r5.conformance.ProfileUtilities in project org.hl7.fhir.core by hapifhir.

the class Analyser method getAbstractChildren.

private List<ElementDefinition> getAbstractChildren(StructureDefinition structure) {
    if (!structure.hasExtension("http://hl7.org/fhir/StructureDefinition/structuredefinition-interface")) {
        return new ArrayList<>();
    }
    List<ElementDefinition> res = new ArrayList<>();
    StructureDefinition sdb = definitions.getStructures().get(structure.getBaseDefinition());
    res.addAll(getAbstractChildren(sdb));
    res.addAll(filterChildren(new ProfileUtilities(null, null, null).getChildList(structure, structure.getSnapshot().getElementFirstRep())));
    return res;
}

Example 22 with ProfileUtilities

use of org.hl7.fhir.r5.conformance.ProfileUtilities in project org.hl7.fhir.core by hapifhir.

the class Analyser method analyse.

public Analysis analyse(StructureDefinition sd) throws Exception {
    Analysis res = new Analysis(definitions, sd);
    if (VersionUtilities.isR4BVer(version)) {
        res.setAncestor(definitions.getStructures().get(getR4bAncestor(sd)));
    } else {
        res.setAncestor(definitions.getStructures().get(sd.getBaseDefinition()));
    }
    res.setAbstract(sd.getAbstract());
    res.setInterface(sd.hasExtension("http://hl7.org/fhir/StructureDefinition/structuredefinition-interface"));
    res.setClassName(sd.getName().equals("List") ? "ListResource" : sd.getName());
    TypeInfo type = new TypeInfo();
    type.setName(res.getClassName());
    if (res.getAncestor() != null) {
        type.setAncestorName(res.getAncestor().getName());
    }
    res.getTypes().put(type.getName(), type);
    res.setRootType(type);
    sd.setUserData("java.type.info", type);
    type.setDefn(sd.getSnapshot().getElementFirstRep());
    type.setChildren(filterChildren(new ProfileUtilities(null, null, null).getChildList(sd, type.getDefn())));
    if (res.getAncestor() != null) {
        type.setInheritedChildren(getAbstractChildren(res.getAncestor()));
    }
    for (ElementDefinition e : type.getChildren()) {
        scanNestedTypes(res, type, type.getName(), e);
    }
    if (sd.getKind() == StructureDefinitionKind.RESOURCE) {
        res.setSearchParams(getSearchParams(sd.getName()));
    }
    for (ElementDefinition e : type.getChildren()) {
        String nn = e.getUserString("java.type");
        if (nn.startsWith("@")) {
            ElementDefinition er = getElementForPath(sd, nn.substring(1));
            if (!er.hasUserData("java.type")) {
                throw new Exception("not found: " + er);
            }
            String nnn = er.getUserString("java.type");
            e.setUserData("java.type", nnn);
            e.setUserData("java.type.info", er.getUserData("java.type.info"));
        }
    }
    return res;
}

Example 23 with ProfileUtilities

use of org.hl7.fhir.r5.conformance.ProfileUtilities in project org.hl7.fhir.core by hapifhir.

the class Analyser method scanNestedTypes.

private void scanNestedTypes(Analysis analysis, TypeInfo type, String path, ElementDefinition e) throws Exception {
    String tn = null;
    if (e.typeSummary().equals("code") && e.hasBinding()) {
        ElementDefinitionBindingComponent cd = e.getBinding();
        if (isEnum(cd)) {
            ValueSet vs = definitions.getValuesets().get(cd.getValueSet());
            if (vs != null) {
                tn = getCodeListType(vs.getName());
                EnumInfo ei = analysis.getEnums().get(tn);
                if (ei == null) {
                    ei = new EnumInfo(tn);
                    analysis.getEnums().put(tn, ei);
                    ei.setValueSet(vs);
                }
                if (tn.equals("SubscriptionStatus")) {
                    // work around cause there's a Resource with the same name
                    tn = "org.hl7.fhir.r4b.model.Enumerations." + tn;
                }
                e.setUserData("java.type", "Enumeration<" + tn + ">");
                e.setUserData("java.enum", ei);
            }
        }
    }
    if (tn == null) {
        if (e.getType().size() > 0 && !e.hasContentReference() && (!Utilities.existsInList(e.getType().get(0).getCode(), "Element", "BackboneElement"))) {
            tn = getTypeName(e);
            if (e.typeSummary().equals("xml:lang"))
                tn = "CodeType";
            if (e.typeSummary().equals("xhtml"))
                tn = "XhtmlNode";
            else if (e.getType().size() > 1)
                tn = "DataType";
            else if (definitions.hasPrimitiveType(tn))
                tn = upFirst(tn) + "Type";
            e.setUserData("java.type", tn);
        } else {
            if (e.hasContentReference()) {
                ElementDefinition er = getElementForPath(analysis.getStructure(), e.getContentReference().substring(1));
                tn = er.getUserString("java.type");
                if (Utilities.noString(tn)) {
                    // have to resolve this later
                    e.setUserData("java.type", "@" + er.getPath());
                } else {
                    e.setUserData("java.type", tn);
                }
            } else {
                String cpath;
                if (e.hasExtension("http://hl7.org/fhir/StructureDefinition/structuredefinition-explicit-type-name")) {
                    tn = upFirst(e.getExtensionString("http://hl7.org/fhir/StructureDefinition/structuredefinition-explicit-type-name")) + "Component";
                    cpath = e.getExtensionString("http://hl7.org/fhir/StructureDefinition/structuredefinition-explicit-type-name");
                } else if (config.getIni().hasProperty("typenames", e.getPath())) {
                    tn = upFirst(config.getIni().getStringProperty("typenames", e.getPath())) + "Component";
                    cpath = config.getIni().getStringProperty("typenames", e.getPath());
                } else {
                    tn = path + upFirst(getTitle(e.getName())) + "Component";
                    cpath = path + getTitle(e.getName());
                }
                if (tn.equals("Element"))
                    tn = "Element_";
                if (analysis.getTypes().containsKey(tn)) {
                    char i = 'A';
                    while (analysis.getTypes().containsKey(tn + i)) {
                        i++;
                    }
                    tn = tn + i;
                }
                e.setUserData("java.type", tn);
                tn = upFirst(tn);
                TypeInfo ctype = new TypeInfo();
                ctype.setName(tn);
                analysis.getTypes().put(ctype.getName(), ctype);
                analysis.getTypeList().add(ctype);
                ctype.setDefn(e);
                ctype.setAncestorName(e.typeSummary());
                ctype.setChildren(filterChildren(new ProfileUtilities(null, null, null).getChildList(analysis.getStructure(), ctype.getDefn())));
                for (ElementDefinition c : ctype.getChildren()) {
                    scanNestedTypes(analysis, ctype, cpath, c);
                }
            }
        }
    }
}

Example 24 with ProfileUtilities

use of org.hl7.fhir.r5.conformance.ProfileUtilities in project org.hl7.fhir.core by hapifhir.

the class SimpleWorkerContext method seeProfile.

private void seeProfile(String url, StructureDefinition p) throws FHIRException {
    if (Utilities.noString(url))
        url = p.getUrl();
    if (!p.hasSnapshot()) {
        if (!p.hasBase())
            throw new DefinitionException("Profile " + p.getName() + " (" + p.getUrl() + ") has no base and no snapshot");
        StructureDefinition sd = fetchResource(StructureDefinition.class, p.getBase());
        if (sd == null)
            throw new DefinitionException("Profile " + p.getName() + " (" + p.getUrl() + ") base " + p.getBase() + " could not be resolved");
        List<ValidationMessage> msgs = new ArrayList<ValidationMessage>();
        ProfileUtilities pu = new ProfileUtilities(this, msgs, this);
        pu.generateSnapshot(sd, p, p.getUrl(), p.getName());
        for (ValidationMessage msg : msgs) {
            if (msg.getLevel() == IssueSeverity.ERROR || msg.getLevel() == IssueSeverity.FATAL)
                throw new DefinitionException("Profile " + p.getName() + " (" + p.getUrl() + "). Error generating snapshot: " + msg.getMessage());
        }
        if (!p.hasSnapshot())
            throw new DefinitionException("Profile " + p.getName() + " (" + p.getUrl() + "). Error generating snapshot");
        pu = null;
    }
    if (structures.containsKey(p.getUrl()))
        throw new DefinitionException("Duplicate structures " + p.getUrl());
    structures.put(p.getId(), p);
    structures.put(p.getUrl(), p);
    if (!p.getUrl().equals(url))
        structures.put(url, p);
}

Example 25 with ProfileUtilities

use of org.hl7.fhir.r5.conformance.ProfileUtilities in project org.hl7.fhir.core by hapifhir.

the class QuestionnaireBuilder method makeTypeList.

private ValueSet makeTypeList(StructureDefinition profile, List<TypeRefComponent> types, String path) {
    ValueSet vs = new ValueSet();
    vs.setName("Type options for " + path);
    vs.setDescription(vs.getName());
    vs.setStatus(ConformanceResourceStatus.ACTIVE);
    vs.setExpansion(new ValueSetExpansionComponent());
    vs.getExpansion().setIdentifier(Factory.createUUID());
    vs.getExpansion().setTimestampElement(DateTimeType.now());
    for (TypeRefComponent t : types) {
        ValueSetExpansionContainsComponent cc = vs.getExpansion().addContains();
        if (t.getCode().equals("Reference") && (t.hasProfile() && t.getProfile().get(0).getValue().startsWith("http://hl7.org/fhir/StructureDefinition/"))) {
            cc.setCode(t.getProfile().get(0).getValue().substring(40));
            cc.setSystem("http://hl7.org/fhir/resource-types");
            cc.setDisplay(cc.getCode());
        } else {
            ProfileUtilities pu = new ProfileUtilities(context, null, null);
            StructureDefinition ps = null;
            if (t.hasProfile())
                ps = pu.getProfile(profile, t.getProfile().get(0).getValue());
            if (ps != null) {
                cc.setCode(t.getProfile().get(0).getValue());
                cc.setDisplay(ps.getSnapshot().getElement().get(0).getType().get(0).getCode());
                cc.setSystem("http://hl7.org/fhir/resource-types");
            } else {
                cc.setCode(t.getCode());
                cc.setDisplay(t.getCode());
                cc.setSystem("http://hl7.org/fhir/data-types");
            }
        }
        t.setUserData("text", cc.getCode());
    }
    return vs;
}