Examples with Extension org.hl7.fhir.r5.model.Extension used on opensource projects

Example 71 with Extension

use of org.hl7.fhir.r5.model.Extension in project kindling by HL7.

the class ProfileGenerator method generateXhtml.

public StructureDefinition generateXhtml() throws Exception {
    uml.getTypes().put("html:div", new UMLPrimitive("html:div"));
    StructureDefinition p = new StructureDefinition();
    p.setId("xhtml");
    p.setUrl("http://hl7.org/fhir/StructureDefinition/xhtml");
    p.setKind(StructureDefinitionKind.PRIMITIVETYPE);
    p.setAbstract(false);
    p.setUserData("filename", "xhtml");
    p.setUserData("path", "narrative.html#xhtml");
    p.setBaseDefinition("http://hl7.org/fhir/StructureDefinition/Element");
    p.setType("xhtml");
    p.setDerivation(TypeDerivationRule.SPECIALIZATION);
    p.setFhirVersion(version);
    p.setVersion(version.toCode());
    ToolingExtensions.setStandardsStatus(p, StandardsStatus.NORMATIVE, "4.0.0");
    ToolResourceUtilities.updateUsage(p, "core");
    p.setName("xhtml");
    p.setPublisher("HL7 FHIR Standard");
    p.addContact().getTelecom().add(Factory.newContactPoint(ContactPointSystem.URL, "http://hl7.org/fhir"));
    p.setDescription("Base StructureDefinition for xhtml Type");
    p.setDate(genDate.getTime());
    p.setStatus(PublicationStatus.fromCode("active"));
    Set<String> containedSlices = new HashSet<String>();
    // first, the differential
    p.setDifferential(new StructureDefinitionDifferentialComponent());
    ElementDefinition ec = new ElementDefinition();
    p.getDifferential().getElement().add(ec);
    ec.setId("xhtml");
    ec.setPath("xhtml");
    ec.setShort("Primitive Type " + "xhtml");
    ec.setDefinition("XHTML");
    ec.setMin(0);
    ec.setMax("*");
    ec = new ElementDefinition();
    p.getDifferential().getElement().add(ec);
    ec.setId("xhtml" + ".extension");
    ec.setPath("xhtml" + ".extension");
    ec.setMax("0");
    ec = new ElementDefinition();
    p.getDifferential().getElement().add(ec);
    ec.setId("xhtml" + ".value");
    ec.setPath("xhtml" + ".value");
    ec.addRepresentation(PropertyRepresentation.XHTML);
    ec.setShort("Actual xhtml");
    ec.setDefinition("Actual xhtml");
    ec.setMin(1);
    ec.setMax("1");
    TypeRefComponent t = ec.addType();
    t.setCodeElement(new UriType());
    t.getFormatCommentsPre().add("Note: special primitive values have a FHIRPath system type. e.g. this is compiler magic (d)");
    t.setCode(Constants.NS_SYSTEM_TYPE + "String");
    ToolingExtensions.addUriExtension(t, ToolingExtensions.EXT_FHIR_TYPE, "string");
    reset();
    // now. the snapshot
    p.setSnapshot(new StructureDefinitionSnapshotComponent());
    ElementDefinition ec1 = new ElementDefinition(true, ElementDefinition.NOT_MODIFIER, ElementDefinition.NOT_IN_SUMMARY);
    p.getSnapshot().getElement().add(ec1);
    ec1.setId("xhtml");
    ec1.setPath("xhtml");
    ec1.setShort("Primitive Type " + "xhtml");
    ec1.setDefinition("XHTML");
    ec1.setMin(0);
    ec1.setMin(0);
    ec1.setMax("*");
    ec1.makeBase();
    generateElementDefinition(p, ec1, null);
    ElementDefinition ec2 = new ElementDefinition(true, ElementDefinition.NOT_MODIFIER, ElementDefinition.NOT_IN_SUMMARY);
    p.getSnapshot().getElement().add(ec2);
    ec2.setId("xhtml.id");
    ec2.setPath("xhtml.id");
    ec2.addRepresentation(PropertyRepresentation.XMLATTR);
    ec2.setDefinition("unique id for the element within a resource (for internal references)");
    ec2.setMin(0);
    ec2.setMax("1");
    ec2.setShort("xml:id (or equivalent in JSON)");
    TypeRefComponent tr = ec2.addType();
    t.getFormatCommentsPre().add("Note: special primitive values have a FHIRPath system type. e.g. this is compiler magic (e)");
    tr.setCode(Constants.NS_SYSTEM_TYPE + "String");
    ToolingExtensions.addUriExtension(t, ToolingExtensions.EXT_FHIR_TYPE, "string");
    generateElementDefinition(p, ec2, ec1);
    ec2.makeBase("Element.id", 0, "1");
    ElementDefinition ex = makeExtensionSlice("extension", p, p.getSnapshot(), null, "xhtml");
    ex.setMax("0");
    ElementDefinition ec3 = new ElementDefinition(true, ElementDefinition.NOT_MODIFIER, ElementDefinition.NOT_IN_SUMMARY);
    p.getSnapshot().getElement().add(ec3);
    ec3.setId("xhtml.value");
    ec3.setPath("xhtml.value");
    ec3.addRepresentation(PropertyRepresentation.XHTML);
    ec3.setShort("Actual xhtml");
    ec3.setDefinition("Actual xhtml");
    ec3.setMin(1);
    ec3.setMax("1");
    t = ec3.addType();
    t.setCodeElement(new UriType());
    t.getFormatCommentsPre().add("Note: special primitive values have a FHIRPath system type. e.g. this is compiler magic (f)");
    t.setCode(Constants.NS_SYSTEM_TYPE + "String");
    ToolingExtensions.addUriExtension(t, ToolingExtensions.EXT_FHIR_TYPE, "string");
    ec3.makeBase();
    generateElementDefinition(p, ec3, ec);
    containedSlices.clear();
    addElementConstraintToSnapshot(p);
    XhtmlNode div = new XhtmlNode(NodeType.Element, "div");
    div.addText("to do");
    p.setText(new Narrative());
    p.getText().setStatus(NarrativeStatus.GENERATED);
    p.getText().setDiv(div);
    checkHasTypes(p);
    return p;
}

Example 72 with Extension

use of org.hl7.fhir.r5.model.Extension in project hl7v2-fhir-converter by LinuxForHealth.

the class Hl7EncounterFHIRConversionTest method test_encounter_PV2segment_missing.

// Test messages with PV1 segment and no PV2 segment, and no serviceProvider provided
// Extension list should be empty and serviceProvider should be null
@ParameterizedTest
@ValueSource(strings = { "ADT^A01", /* "ADT^A02", "ADT^A03", "ADT^A04", */
"ADT^A08", // MDM messages are not tested here because they do not have PV2 segments
"OMP^O09", "ORU^R01", "RDE^O11", "RDE^O25", "VXU^V04" })
void test_encounter_PV2segment_missing(String message) {
    String hl7message = "MSH|^~\\&|WHI_LOAD_GENERATOR|IBM_TORONTO_LAB||IBM|20210330144208|8078780|" + message + "|MSGID_4e1c575f-6c6d-47b2-ab9f-829f20c96db2|T|2.3\n" + "EVN||20210330144208||ADT_EVENT|007|20210309140700\n" + "PID|1||0a8a1752-e336-43e1-bf7f-0c8f6f437ca3^^^MRN||Patient^Load^Generator||19690720|M|Patient^Alias^Generator|AA|9999^^CITY^STATE^ZIP^CAN|COUNTY|(866)845-0900||ENGLISH^ENGLISH|SIN|NONE|Account_0a8a1752-e336-43e1-bf7f-0c8f6f437ca3|123-456-7890|||N|BIRTH PLACE|N||||||N\n" + "PV1||I|^^^^^5642 Hilly Av||||2905^Doctor^Attending^M^IV^^M.D|5755^Doctor^Referring^^Sr|770542^Doctor^Consulting^Jr||||||||59367^Doctor^Admitting||Visit_0a3be81e-144b-4885-9b4e-c5cd33c8f038|||||||||||||||||||||||||20210407191342\n";
    Encounter encounter = ResourceUtils.getEncounter(ftv, hl7message);
    Narrative encText = encounter.getText();
    assertNull(encText.getStatus());
    assertThat(encText.getDiv().getChildNodes()).isEmpty();
    List<Extension> extensionList = encounter.getExtension();
    assertNotNull(extensionList);
    assertThat(extensionList).isEmpty();
    Reference serviceProvider = encounter.getServiceProvider();
    assertThat(serviceProvider).isNotNull();
    assertThat(serviceProvider.getReference()).isNull();
}

Example 73 with Extension

use of org.hl7.fhir.r5.model.Extension in project hl7v2-fhir-converter by LinuxForHealth.

the class Hl7EncounterFHIRConversionTest method testEncounterModeOfArrival.

@Test
void testEncounterModeOfArrival() {
    String hl7message = "MSH|^~\\&|PROSOLV|SENTARA|WHIA|IBM|20151008111200|S1|ADT^A01^ADT_A01|MSGID000001|T|2.6|10092|PRPA008|AL|AL|100|8859/1|ENGLISH|ARM|ARM5007\n" + "EVN|A04|20151008111200|20171013152901|O|OID1006|20171013153621|EVN1009\n" + "PID|||1234^^^^MR||DOE^JANE^|||F||||||||||||||||||||||\n" + "PV1|1|E|SAN JOSE|A|10089|MILPITAS|2740^Torres^Callie|2913^Grey^Meredith^F|3065^Sloan^Mark^J|CAR|FOSTER CITY|AD|R|1|A4|VI|9052^Shepeard^Derek^|AH|10019181|FIC1002|IC|CC|CR|CO|20161012034052|60000|6|AC|GHBR|20160926054052|AC5678|45000|15000|D|20161016154413|DCD|SAN FRANCISCO|VEG|RE|O|AV|FREMONT|CALIFORNIA|20161013154626|20161014154634|10000|14000|2000|4000|POL8009|V|PHY6007\n" + "PV2|SAN BRUNO|AC4567|vomits|less equipped|purse|SAN MATEO|HO|20171014154626|20171018154634|4|3|DIAHHOREA|RSA456|20161013154626|Y|D|20191026001640|O|Y|1|F|Y|KAISER|AI|2|20161013154626|ED|20171018001900|20161013154626|10000|RR|Y|20171108002129|Y|Y|N|N|C^Car^HL70430\n";
    Encounter encounter = ResourceUtils.getEncounter(ftv, hl7message);
    List<Extension> extensionList = encounter.getExtension();
    assertNotNull(extensionList);
    assertThat(extensionList).hasSize(1);
    boolean extFound = false;
    for (Extension ext : extensionList) {
        if (ext.getUrl().equals("http://hl7.org/fhir/StructureDefinition/encounter-modeOfArrival")) {
            extFound = true;
            assertTrue(ext.getValue() instanceof Coding);
            Coding valueCoding = (Coding) ext.getValue();
            assertThat(valueCoding.getCode()).isEqualTo("C");
            assertThat(valueCoding.getDisplay()).isEqualTo("Car");
            assertThat(valueCoding.getSystem()).isEqualTo("http://terminology.hl7.org/CodeSystem/v2-0430");
            break;
        }
    }
    assertTrue(extFound, "modeOfArrival extension not found");
}

Example 74 with Extension

use of org.hl7.fhir.r5.model.Extension in project hl7v2-fhir-converter by LinuxForHealth.

the class Hl7EncounterFHIRConversionTest method test_encounter_modeOfarrival_invalid_with_system.

@Test
void test_encounter_modeOfarrival_invalid_with_system() {
    String hl7message = "MSH|^~\\&|WHI_LOAD_GENERATOR|IBM_TORONTO_LAB||IBM|20210330144208|8078780|ADT^A01|MSGID_4e1c575f-6c6d-47b2-ab9f-829f20c96db2|T|2.3\n" + "EVN||20210330144208||ADT_EVENT|007|20210309140700\n" + "PID|1||0a8a1752-e336-43e1-bf7f-0c8f6f437ca3^^^MRN||Patient^Load^Generator||19690720|M|Patient^Alias^Generator|AA|9999^^CITY^STATE^ZIP^CAN|COUNTY|(866)845-0900||ENGLISH^ENGLISH|SIN|NONE|Account_0a8a1752-e336-43e1-bf7f-0c8f6f437ca3|123-456-7890|||N|BIRTH PLACE|N||||||N\n" + "PV1||I|^^^Toronto^^5642 Hilly Av||||2905^Doctor^Attending^M^IV^^M.D|5755^Doctor^Referring^^Sr|770542^Doctor^Consulting^Jr||||||||59367^Doctor^Admitting||Visit_0a3be81e-144b-4885-9b4e-c5cd33c8f038|||||||||||||||||||||||||20210407191342\n" + "PV2||TEL||||X-5546||20210330144208|20210309||||||||||||n|N|South Shore Hosptial Weymouth^SSHW^^^^^^SSH-WEYMOUTH|||||||||N||||||AMB^AMBULATORY^FUNKY\n";
    Encounter encounter = ResourceUtils.getEncounter(ftv, hl7message);
    List<Extension> extensionList = encounter.getExtension();
    assertNotNull(extensionList);
    assertThat(extensionList).isNotEmpty();
    boolean extFound = false;
    for (Extension ext : extensionList) {
        if (ext.getUrl().equals("http://hl7.org/fhir/StructureDefinition/encounter-modeOfArrival")) {
            extFound = true;
            assertTrue(ext.getValue() instanceof Coding);
            Coding valueCoding = (Coding) ext.getValue();
            assertThat(valueCoding.getCode()).isEqualTo("AMB");
            assertThat(valueCoding.getDisplay()).isEqualTo("AMBULATORY");
            assertThat(valueCoding.getSystem()).isEqualTo("urn:id:FUNKY");
            break;
        }
    }
    assertTrue(extFound, "modeOfArrival extension not found");
}

Example 75 with Extension

use of org.hl7.fhir.r5.model.Extension in project hl7v2-fhir-converter by LinuxForHealth.

the class Hl7EncounterFHIRConversionTest method test_encounter_modeOfarrival_invalid_singlevalue.

@Test
void test_encounter_modeOfarrival_invalid_singlevalue() {
    String hl7message = "MSH|^~\\&|WHI_LOAD_GENERATOR|IBM_TORONTO_LAB||IBM|20210330144208|8078780|ADT^A01|MSGID_4e1c575f-6c6d-47b2-ab9f-829f20c96db2|T|2.3\n" + "EVN||20210330144208||ADT_EVENT|007|20210309140700\n" + "PID|1||0a8a1752-e336-43e1-bf7f-0c8f6f437ca3^^^MRN||Patient^Load^Generator||19690720|M|Patient^Alias^Generator|AA|9999^^CITY^STATE^ZIP^CAN|COUNTY|(866)845-0900||ENGLISH^ENGLISH|SIN|NONE|Account_0a8a1752-e336-43e1-bf7f-0c8f6f437ca3|123-456-7890|||N|BIRTH PLACE|N||||||N\n" + "PV1||I|^^^Toronto^^5642 Hilly Av||||2905^Doctor^Attending^M^IV^^M.D|5755^Doctor^Referring^^Sr|770542^Doctor^Consulting^Jr||||||||59367^Doctor^Admitting||Visit_0a3be81e-144b-4885-9b4e-c5cd33c8f038|||||||||||||||||||||||||20210407191342\n" + "PV2||TEL||||X-5546||20210330144208|20210309||||||||||||n|N|South Shore Hosptial Weymouth^SSHW^^^^^^SSH-WEYMOUTH|||||||||N||||||AMBULATORY\n";
    Encounter encounter = ResourceUtils.getEncounter(ftv, hl7message);
    List<Extension> extensionList = encounter.getExtension();
    assertNotNull(extensionList);
    assertThat(extensionList).isNotEmpty();
    boolean extFound = false;
    for (Extension ext : extensionList) {
        if (ext.getUrl().equals("http://hl7.org/fhir/StructureDefinition/encounter-modeOfArrival")) {
            extFound = true;
            assertTrue(ext.getValue() instanceof Coding);
            Coding valueCoding = (Coding) ext.getValue();
            assertThat(valueCoding.getCode()).isEqualTo("AMBULATORY");
            assertThat(valueCoding.getDisplay()).isNull();
            assertThat(valueCoding.getSystem()).isNull();
            break;
        }
    }
    assertTrue(extFound, "modeOfArrival extension not found");
}