Examples with NoSuchStudyException org.obiba.mica.study.NoSuchStudyException used on opensource projects

Example 1 with NoSuchStudyException

use of org.obiba.mica.study.NoSuchStudyException in project mica2 by obiba.

the class VariableQuery method processHit.

/**
 * Fill the variable resolver dto with user-friendly labels about the variable, the dataset and the study.
 *
 * @param resolver
 * @param variable
 * @param studyMap study cache
 * @return
 */
private Mica.DatasetVariableResolverDto processHit(DatasetVariable.IdResolver resolver, DatasetVariable variable, Map<String, BaseStudy> studyMap, Map<String, Network> networkMap) {
    Mica.DatasetVariableResolverDto.Builder builder = dtos.asDto(resolver, variable);
    String studyId = resolver.hasStudyId() ? resolver.getStudyId() : null;
    if (resolver.getType() == DatasetVariable.Type.Collected || resolver.getType() == DatasetVariable.Type.Dataschema || resolver.getType() == DatasetVariable.Type.Harmonized) {
        studyId = variable.getStudyId();
    }
    if (studyId != null) {
        builder.setStudyId(studyId);
        try {
            BaseStudy study;
            if (studyMap.containsKey(studyId)) {
                study = studyMap.get(studyId);
            } else {
                study = publishedStudyService.findById(studyId);
                studyMap.put(studyId, study);
            }
            if (study != null) {
                builder.addAllStudyName(dtos.asDto(study.getName()));
                builder.addAllStudyAcronym(dtos.asDto(study.getAcronym()));
                String dceId = variable.getDceId();
                if (!Strings.isNullOrEmpty(dceId)) {
                    String[] parts = dceId.split(":");
                    if (parts.length > 1) {
                        Optional<Population> optionalPopulation = study.getPopulations().stream().filter(population -> population.getId().equals(parts[1])).findFirst();
                        if (optionalPopulation.isPresent()) {
                            Population population = optionalPopulation.get();
                            builder.addAllPopulationName(dtos.asDto(population.getName()));
                            if (parts.length > 2) {
                                population.getDataCollectionEvents().stream().filter(dce -> dce.getId().equals(parts[2])).findFirst().ifPresent(dataCollectionEvent -> builder.addAllDceName(dtos.asDto(dataCollectionEvent.getName())));
                            }
                        }
                    }
                }
            }
        } catch (NoSuchStudyException e) {
        }
    }
    return builder.build();
}