use of io.adminshell.aas.v3.model.DataElement in project FAAAST-Service by FraunhoferIOSB.
the class AasServiceNodeManager method setRelationshipValue.
/**
* Sets the values for the given RelationshipElement.
*
* @param aasElement The desired RelationshipElement.
* @param value The new value.
* @throws StatusException If the operation fails
*/
private void setRelationshipValue(AASRelationshipElementType aasElement, RelationshipElementValue value) throws StatusException {
if (aasElement == null) {
throw new IllegalArgumentException("aasElement is null");
} else if (value == null) {
throw new IllegalArgumentException("value is null");
}
try {
Reference ref = new DefaultReference.Builder().keys(value.getFirst()).build();
setAasReferenceData(ref, aasElement.getFirstNode(), false);
ref = new DefaultReference.Builder().keys(value.getSecond()).build();
setAasReferenceData(ref, aasElement.getSecondNode(), false);
if ((aasElement instanceof AASAnnotatedRelationshipElementType) && (value instanceof AnnotatedRelationshipElementValue)) {
AASAnnotatedRelationshipElementType annotatedElement = (AASAnnotatedRelationshipElementType) aasElement;
AnnotatedRelationshipElementValue annotatedValue = (AnnotatedRelationshipElementValue) value;
UaNode[] annotationNodes = annotatedElement.getAnnotationNode().getComponents();
Map<String, DataElementValue> valueMap = annotatedValue.getAnnotations();
if (annotationNodes.length != valueMap.size()) {
logger.warn("Size of Value (" + valueMap.size() + ") doesn't match the number of AnnotationNodes (" + annotationNodes.length + ")");
throw new IllegalArgumentException("Size of Value doesn't match the number of AnnotationNodes");
}
// The Key of the Map is the IDShort of the DataElement (in our case the BrowseName)
for (UaNode annotationNode : annotationNodes) {
if (valueMap.containsKey(annotationNode.getBrowseName().getName())) {
setDataElementValue(annotationNode, valueMap.get(annotationNode.getBrowseName().getName()));
}
}
} else {
logger.info("setRelationshipValue: No AnnotatedRelationshipElement " + aasElement.getBrowseName().getName());
}
} catch (Throwable ex) {
logger.error("setAnnotatedRelationshipValue Exception", ex);
throw ex;
}
}
use of io.adminshell.aas.v3.model.DataElement in project FAAAST-Service by FraunhoferIOSB.
the class AasServiceNodeManager method doRemoveFromMaps.
/**
* Removes the given SubmodelElement from the maps.
*
* @param element The desired SubmodelElement
* @param reference The reference to the desired SubmodelElement
* @param referable The corresponding referable
*/
private void doRemoveFromMaps(AASSubmodelElementType element, Reference reference, Referable referable) {
try {
logger.debug("doRemoveFromMaps: remove SubmodelElement " + AasUtils.asString(reference));
if (submodelElementOpcUAMap.containsKey(reference)) {
submodelElementOpcUAMap.remove(reference);
logger.debug("doRemoveFromMaps: remove SubmodelElement from submodelElementOpcUAMap: " + AasUtils.asString(reference));
}
if (element instanceof AASPropertyType) {
AASPropertyType prop = (AASPropertyType) element;
if (submodelElementAasMap.containsKey(prop.getValueNode().getNodeId())) {
submodelElementAasMap.remove(prop.getValueNode().getNodeId());
logger.debug("doRemoveFromMaps: remove Property NodeId " + prop.getValueNode().getNodeId());
}
} else if (element instanceof AASRangeType) {
AASRangeType range = (AASRangeType) element;
if (submodelElementAasMap.containsKey(range.getMinNode().getNodeId())) {
submodelElementAasMap.remove(range.getMinNode().getNodeId());
logger.debug("doRemoveFromMaps: remove Range Min NodeId " + range.getMinNode().getNodeId());
}
if (submodelElementAasMap.containsKey(range.getMaxNode().getNodeId())) {
submodelElementAasMap.remove(range.getMaxNode().getNodeId());
logger.debug("doRemoveFromMaps: remove Range Max NodeId " + range.getMaxNode().getNodeId());
}
} else if (element instanceof AASOperationType) {
AASOperationType oper = (AASOperationType) element;
if (submodelElementAasMap.containsKey(oper.getOperationNode().getNodeId())) {
submodelElementAasMap.remove(oper.getOperationNode().getNodeId());
logger.debug("doRemoveFromMaps: remove Operation NodeId " + oper.getOperationNode().getNodeId());
}
} else if (element instanceof AASBlobType) {
AASBlobType blob = (AASBlobType) element;
if (submodelElementAasMap.containsKey(blob.getValueNode().getNodeId())) {
submodelElementAasMap.remove(blob.getValueNode().getNodeId());
logger.debug("doRemoveFromMaps: remove Blob NodeId " + blob.getValueNode().getNodeId());
}
} else if (element instanceof AASMultiLanguagePropertyType) {
AASMultiLanguagePropertyType mlp = (AASMultiLanguagePropertyType) element;
if (submodelElementAasMap.containsKey(mlp.getValueNode().getNodeId())) {
submodelElementAasMap.remove(mlp.getValueNode().getNodeId());
logger.debug("doRemoveFromMaps: remove AASMultiLanguageProperty NodeId " + mlp.getValueNode().getNodeId());
}
} else if (element instanceof AASReferenceElementType) {
AASReferenceElementType refElem = (AASReferenceElementType) element;
NodeId nid = refElem.getValueNode().getKeysNode().getNodeId();
if (submodelElementAasMap.containsKey(nid)) {
submodelElementAasMap.remove(nid);
logger.debug("doRemoveFromMaps: remove AASReferenceElement NodeId " + nid);
}
} else if (element instanceof AASRelationshipElementType) {
AASRelationshipElementType relElem = (AASRelationshipElementType) element;
NodeId nid = relElem.getFirstNode().getKeysNode().getNodeId();
if (submodelElementAasMap.containsKey(nid)) {
submodelElementAasMap.remove(nid);
logger.debug("doRemoveFromMaps: remove AASRelationshipElement First NodeId " + nid);
}
nid = relElem.getSecondNode().getKeysNode().getNodeId();
if (submodelElementAasMap.containsKey(nid)) {
submodelElementAasMap.remove(nid);
logger.debug("doRemoveFromMaps: remove AASRelationshipElement Second NodeId " + nid);
}
if (relElem instanceof AASAnnotatedRelationshipElementType) {
if (referable instanceof AnnotatedRelationshipElement) {
AnnotatedRelationshipElement annRelElem = (AnnotatedRelationshipElement) referable;
for (DataElement de : annRelElem.getAnnotations()) {
doRemoveFromMaps(reference, de);
}
}
}
} else if (element instanceof AASEntityType) {
AASEntityType ent = (AASEntityType) element;
if ((ent.getGlobalAssetIdNode() != null) && (ent.getGlobalAssetIdNode().getKeysNode() != null)) {
NodeId nid = ent.getGlobalAssetIdNode().getKeysNode().getNodeId();
if (submodelElementAasMap.containsKey(nid)) {
submodelElementAasMap.remove(nid);
logger.debug("doRemoveFromMaps: remove Entity GlobalAssetId NodeId " + nid);
}
}
if (submodelElementAasMap.containsKey(ent.getEntityTypeNode().getNodeId())) {
submodelElementAasMap.remove(ent.getEntityTypeNode().getNodeId());
logger.debug("doRemoveFromMaps: remove Entity EntityType NodeId " + ent.getEntityTypeNode().getNodeId());
}
} else if (referable instanceof SubmodelElementCollection) {
SubmodelElementCollection sec = (SubmodelElementCollection) referable;
for (SubmodelElement se : sec.getValues()) {
doRemoveFromMaps(reference, se);
}
}
// Capability and File are currently not relevant here
} catch (Throwable ex) {
logger.error("doRemoveFromMaps Exception", ex);
throw ex;
}
}
use of io.adminshell.aas.v3.model.DataElement in project org.hl7.fhir.core by hapifhir.
the class LoincToDEConvertor method processLoincCodes.
private void processLoincCodes() {
Element row = XMLUtil.getFirstChild(xml.getDocumentElement());
int i = 0;
while (row != null) {
i++;
if (i % 1000 == 0)
System.out.print(".");
String code = col(row, "LOINC_NUM");
String comp = col(row, "COMPONENT");
DataElement de = new DataElement();
de.setId("loinc-" + code);
de.setMeta(new Meta().setLastUpdatedElement(InstantType.now()));
bundle.getEntry().add(new BundleEntryComponent().setResource(de));
Identifier id = new Identifier();
id.setSystem("http://hl7.org/fhir/commondataelement/loinc");
id.setValue(code);
de.addIdentifier(id);
de.setPublisher("Regenstrief + FHIR Project Team");
if (!col(row, "STATUS").equals("ACTIVE"))
// till we get good at this
de.setStatus(ConformanceResourceStatus.DRAFT);
else
de.setStatus(ConformanceResourceStatus.RETIRED);
de.setDateElement(DateTimeType.now());
de.setName(comp);
ElementDefinition dee = de.addElement();
// PROPERTY ignore
// TIME_ASPCT
// SYSTEM
// SCALE_TYP
// METHOD_TYP
// dee.getCategory().add(new CodeableConcept().setText(col(row, "CLASS")));
// SOURCE
// DATE_LAST_CHANGED - should be in ?
// CHNG_TYPE
dee.setComments(col(row, "COMMENTS"));
if (hasCol(row, "CONSUMER_NAME"))
dee.addAlias(col(row, "CONSUMER_NAME"));
// SURVEY_QUEST_SRC
if (hasCol(row, "RELATEDNAMES2")) {
String n = col(row, "RELATEDNAMES2");
for (String s : n.split("\\;")) {
if (!Utilities.noString(s))
dee.addAlias(s);
}
}
dee.addAlias(col(row, "SHORTNAME"));
// ORDER_OBS
// CDISC Code
// HL7_FIELD_SUBFIELD_ID
// ------------------ EXTERNAL_COPYRIGHT_NOTICE todo
dee.setDefinition(col(row, "LONG_COMMON_NAME"));
// HL7_V2_DATATYPE
String cc = makeType(col(row, "HL7_V3_DATATYPE"), code);
if (cc != null)
dee.addType().setCode(cc);
// todo... CURATED_RANGE_AND_UNITS
// todo: DOCUMENT_SECTION
// STATUS_REASON
// STATUS_TEXT
// CHANGE_REASON_PUBLIC
// COMMON_TEST_RANK
// COMMON_ORDER_RANK
// COMMON_SI_TEST_RANK
// HL7_ATTACHMENT_STRUCTURE
// units:
// UNITSREQUIRED
// SUBMITTED_UNITS
ToolingExtensions.setAllowableUnits(dee, makeUnits(col(row, "EXAMPLE_UNITS"), col(row, "EXAMPLE_UCUM_UNITS")));
// EXAMPLE_SI_UCUM_UNITS
row = XMLUtil.getNextSibling(row);
}
System.out.println("done");
}
use of io.adminshell.aas.v3.model.DataElement in project org.hl7.fhir.core by hapifhir.
the class ResourceUtilities method representDataElementCollection.
public static String representDataElementCollection(IWorkerContext context, Bundle bundle, boolean profileLink, String linkBase) {
StringBuilder b = new StringBuilder();
DataElement common = showDECHeader(b, bundle);
b.append("<table class=\"grid\">\r\n");
List<String> cols = chooseColumns(bundle, common, b, profileLink);
for (BundleEntryComponent e : bundle.getEntry()) {
DataElement de = (DataElement) e.getResource();
renderDE(de, cols, b, profileLink, linkBase);
}
b.append("</table>\r\n");
return b.toString();
}
use of io.adminshell.aas.v3.model.DataElement in project org.hl7.fhir.core by hapifhir.
the class ResourceUtilities method showDECHeader.
private static DataElement showDECHeader(StringBuilder b, Bundle bundle) {
DataElement meta = new DataElement();
DataElement prototype = (DataElement) bundle.getEntry().get(0).getResource();
meta.setPublisher(prototype.getPublisher());
meta.getContact().addAll(prototype.getContact());
meta.setStatus(prototype.getStatus());
meta.setDate(prototype.getDate());
meta.addElement().getType().addAll(prototype.getElement().get(0).getType());
for (BundleEntryComponent e : bundle.getEntry()) {
DataElement de = (DataElement) e.getResource();
if (!Base.compareDeep(de.getPublisherElement(), meta.getPublisherElement(), false))
meta.setPublisherElement(null);
if (!Base.compareDeep(de.getContact(), meta.getContact(), false))
meta.getContact().clear();
if (!Base.compareDeep(de.getStatusElement(), meta.getStatusElement(), false))
meta.setStatusElement(null);
if (!Base.compareDeep(de.getDateElement(), meta.getDateElement(), false))
meta.setDateElement(null);
if (!Base.compareDeep(de.getElement().get(0).getType(), meta.getElement().get(0).getType(), false))
meta.getElement().get(0).getType().clear();
}
if (meta.hasPublisher() || meta.hasContact() || meta.hasStatus() || meta.hasDate()) /* || meta.hasType() */
{
b.append("<table class=\"grid\">\r\n");
if (meta.hasPublisher())
b.append("<tr><td>Publisher:</td><td>" + meta.getPublisher() + "</td></tr>\r\n");
if (meta.hasContact()) {
b.append("<tr><td>Contacts:</td><td>");
boolean firsti = true;
for (DataElementContactComponent c : meta.getContact()) {
if (firsti)
firsti = false;
else
b.append("<br/>");
if (c.hasName())
b.append(Utilities.escapeXml(c.getName()) + ": ");
boolean first = true;
for (ContactPoint cp : c.getTelecom()) {
if (first)
first = false;
else
b.append(", ");
renderContactPoint(b, cp);
}
}
b.append("</td></tr>\r\n");
}
if (meta.hasStatus())
b.append("<tr><td>Status:</td><td>" + meta.getStatus().toString() + "</td></tr>\r\n");
if (meta.hasDate())
b.append("<tr><td>Date:</td><td>" + meta.getDateElement().asStringValue() + "</td></tr>\r\n");
if (meta.getElement().get(0).hasType())
b.append("<tr><td>Type:</td><td>" + renderType(meta.getElement().get(0).getType()) + "</td></tr>\r\n");
b.append("</table>\r\n");
}
return meta;
}
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