Examples with ResourceDefn org.hl7.fhir.definitions.model.ResourceDefn used on opensource projects

Example 61 with ResourceDefn

use of org.hl7.fhir.definitions.model.ResourceDefn in project kindling by HL7.

the class XVerPathsGenerator method execute.

public void execute() throws IOException {
    // load the R4 content; can't be an extension if it already matches R4
    loadR4();
    // iterate all the elements, building a list
    for (String s : sorted(definitions.getTypes().keySet())) {
        ElementDefn ed = definitions.getTypes().get(s);
        process(ed);
    }
    for (String s : sorted(definitions.getBaseResources().keySet())) {
        ResourceDefn ed = definitions.getBaseResources().get(s);
        process(ed.getRoot());
    }
    for (String s : sorted(definitions.getResources().keySet())) {
        ResourceDefn ed = definitions.getResources().get(s);
        process(ed.getRoot());
    }
    StringBuilder r5 = new StringBuilder();
    r5.append("{\r\n");
    int i = 0;
    for (ElementInfo ei : r5List) {
        r5.append(" \"" + ei.path + "\": { ");
        if (ei.types.size() > 0) {
            r5.append("\"types\": [");
            boolean first = true;
            for (String s : ei.types) {
                if (first)
                    first = false;
                else
                    r5.append(", ");
                r5.append("\"" + s + "\"");
            }
            r5.append("]");
        } else if (ei.elements.size() > 0) {
            r5.append("\"elements\": [");
            boolean first = true;
            for (String s : ei.elements) {
                if (first)
                    first = false;
                else
                    r5.append(", ");
                r5.append("\"" + s + "\"");
            }
            r5.append("]");
        }
        i++;
        if (i == r5List.size()) {
            r5.append(" }\r\n");
        } else {
            r5.append(" },\r\n");
        }
    }
    r5.append("}\r\n");
    TextFile.stringToFile(r5.toString(), dest);
}

Example 62 with ResourceDefn

use of org.hl7.fhir.definitions.model.ResourceDefn in project kindling by HL7.

the class MappingsGenerator method generate.

public void generate(ResourceDefn resource) throws IOException {
    StringBuilder s = new StringBuilder();
    List<String> maps = new ArrayList<String>();
    listKnownMappings(resource.getRoot(), maps);
    Collections.sort(maps, new Sorter());
    StringBuilder list = new StringBuilder();
    for (String m : maps) {
        MappingSpace ms = definitions.getMapTypes().get(m);
        list.append("|" + ms.getTitle() + "#" + ms.getId());
        s.append("<a name=\"" + m + "\"> </a><a name=\"" + ms.getId() + "\"> </a>");
        if (!Utilities.noString(ms.getLink()))
            s.append("<h3>" + ms.getTitle() + " (<a href=\"" + ms.getLink() + "\">" + m + "</a>)</h3>");
        else
            s.append("<h3>" + ms.getTitle() + " (" + m + ")</h3>");
        XhtmlNode pre = ms.getPreamble();
        if (pre != null)
            s.append(new XhtmlComposer(XhtmlComposer.HTML).compose(pre));
        s.append("<table class=\"grid\">\r\n");
        genElement(s, 0, resource.getRoot(), m, ROOT_ONLY, true, ms.isSparse());
        genInherited(s, resource, m);
        genElement(s, 0, resource.getRoot(), m, CHILDREN_ONLY, true, ms.isSparse());
        s.append("</table>\r\n");
    }
    mappings = s.toString();
    mappingsList = list.length() == 0 ? "" : list.toString().substring(1);
}

Example 63 with ResourceDefn

use of org.hl7.fhir.definitions.model.ResourceDefn in project kindling by HL7.

the class ProfileGenerator method generateLogicalModel.

public StructureDefinition generateLogicalModel(ImplementationGuideDefn igd, ResourceDefn r) throws Exception {
    StructureDefinition p = new StructureDefinition();
    p.setId(r.getRoot().getName());
    p.setUrl("http://hl7.org/fhir/StructureDefinition/" + r.getRoot().getName());
    p.setKind(StructureDefinitionKind.LOGICAL);
    p.setAbstract(false);
    p.setUserData("filename", r.getName().toLowerCase());
    p.setUserData("path", igd.getPrefix() + r.getName().toLowerCase() + ".html");
    p.setTitle(r.getName());
    p.setFhirVersion(version);
    p.setVersion(version.toCode());
    p.setType(r.getRoot().getName());
    ToolingExtensions.setStandardsStatus(p, r.getStatus(), null);
    ToolResourceUtilities.updateUsage(p, igd.getCode());
    p.setName(r.getRoot().getName());
    p.setPublisher("Health Level Seven International" + (r.getWg() == null ? " " + igd.getCommittee() : " (" + r.getWg().getName() + ")"));
    p.addContact().getTelecom().add(Factory.newContactPoint(ContactPointSystem.URL, "http://hl7.org/fhir"));
    if (r.getWg() != null) {
        p.addContact().getTelecom().add(Factory.newContactPoint(ContactPointSystem.URL, r.getWg().getUrl()));
        ToolingExtensions.setCodeExtension(p, ToolingExtensions.EXT_WORKGROUP, r.getWg().getCode());
    }
    p.setDescription("Logical Model: " + r.getDefinition());
    p.setPurpose(r.getRoot().getRequirements());
    if (!p.hasPurpose())
        p.setPurpose(r.getRoot().getRequirements());
    p.setDate(genDate.getTime());
    // DSTU
    p.setStatus(PublicationStatus.fromCode("draft"));
    Set<String> containedSlices = new HashSet<String>();
    // first, the differential
    p.setSnapshot(new StructureDefinitionSnapshotComponent());
    defineElement(null, p, p.getSnapshot().getElement(), r.getRoot(), r.getRoot().getName(), containedSlices, new ArrayList<ProfileGenerator.SliceHandle>(), SnapShotMode.None, true, "Element", "Element", true);
    addElementConstraintToSnapshot(p);
    XhtmlNode div = new XhtmlNode(NodeType.Element, "div");
    div.addText("to do");
    p.setText(new Narrative());
    p.getText().setStatus(NarrativeStatus.GENERATED);
    p.getText().setDiv(div);
    return p;
}

Example 64 with ResourceDefn

use of org.hl7.fhir.definitions.model.ResourceDefn in project kindling by HL7.

the class ProfileGenerator method makeSearchParam.

public SearchParameter makeSearchParam(StructureDefinition p, String id, String rn, SearchParameterDefn spd, ResourceDefn rd) throws Exception {
    boolean shared;
    boolean created = true;
    SearchParameter sp;
    if (definitions.getCommonSearchParameters().containsKey(rn + "::" + spd.getCode())) {
        shared = true;
        CommonSearchParameter csp = definitions.getCommonSearchParameters().get(rn + "::" + spd.getCode());
        if (csp.getDefinition() == null) {
            sp = new SearchParameter();
            csp.setDefinition(sp);
            sp.setId(csp.getId());
        } else {
            created = false;
            sp = csp.getDefinition();
        }
    } else {
        shared = false;
        sp = new SearchParameter();
        sp.setId(id.replace("[", "").replace("]", ""));
    }
    spd.setCommonId(sp.getId());
    if (created) {
        sp.setUrl("http://hl7.org/fhir/SearchParameter/" + sp.getId());
        sp.setVersion(version.toCode());
        if (context.getSearchParameter(sp.getUrl()) != null)
            throw new Exception("Duplicated Search Parameter " + sp.getUrl());
        context.cacheResource(sp);
        spd.setResource(sp);
        definitions.addNs(sp.getUrl(), "Search Parameter: " + sp.getName(), rn.toLowerCase() + ".html#search");
        sp.setStatus(spd.getStandardsStatus() == StandardsStatus.NORMATIVE ? PublicationStatus.fromCode("active") : PublicationStatus.fromCode("draft"));
        StandardsStatus sst = ToolingExtensions.getStandardsStatus(sp);
        if (sst == null || (spd.getStandardsStatus() == null && spd.getStandardsStatus().isLowerThan(sst)))
            ToolingExtensions.setStandardsStatus(sp, spd.getStandardsStatus(), spd.getNormativeVersion());
        sp.setExperimental(p.getExperimental());
        sp.setName(spd.getCode());
        sp.setCode(spd.getCode());
        sp.setDate(genDate.getTime());
        sp.setPublisher(p.getPublisher());
        for (ContactDetail tc : p.getContact()) {
            ContactDetail t = sp.addContact();
            if (tc.hasNameElement())
                t.setNameElement(tc.getNameElement().copy());
            for (ContactPoint ts : tc.getTelecom()) t.getTelecom().add(ts.copy());
        }
        if (!definitions.hasResource(p.getType()) && !p.getType().equals("Resource") && !p.getType().equals("DomainResource"))
            throw new Exception("unknown resource type " + p.getType());
        sp.setType(getSearchParamType(spd.getType()));
        if (sp.getType() == SearchParamType.REFERENCE && spd.isHierarchy()) {
            sp.addModifier(SearchParameter.SearchModifierCode.BELOW);
            sp.addModifier(SearchParameter.SearchModifierCode.ABOVE);
        }
        if (shared) {
            sp.setDescription("Multiple Resources: \r\n\r\n* [" + rn + "](" + rn.toLowerCase() + ".html): " + spd.getDescription() + "\r\n");
        } else
            sp.setDescription(preProcessMarkdown(spd.getDescription(), "Search Description"));
        if (!Utilities.noString(spd.getExpression()))
            sp.setExpression(spd.getExpression());
        // addModifiers(sp);
        addComparators(sp);
        String xpath = Utilities.noString(spd.getXPath()) ? new XPathQueryGenerator(this.definitions, null, null).generateXpath(spd.getPaths(), rn) : spd.getXPath();
        if (xpath != null) {
            if (xpath.contains("[x]"))
                xpath = convertToXpath(xpath);
            sp.setXpath(xpath);
            sp.setXpathUsage(spd.getxPathUsage());
        }
        if (sp.getType() == SearchParamType.COMPOSITE) {
            for (CompositeDefinition cs : spd.getComposites()) {
                SearchParameterDefn cspd = findSearchParameter(rd, cs.getDefinition());
                if (cspd != null)
                    sp.addComponent().setExpression(cs.getExpression()).setDefinition(cspd.getUrl());
                else
                    sp.addComponent().setExpression(cs.getExpression()).setDefinition("http://hl7.org/fhir/SearchParameter/" + rn + "-" + cs.getDefinition());
            }
            sp.setMultipleOr(false);
        }
        sp.addBase(p.getType());
    } else {
        if (sp.getType() != getSearchParamType(spd.getType()))
            throw new FHIRException("Type mismatch on common parameter: expected " + sp.getType().toCode() + " but found " + getSearchParamType(spd.getType()).toCode());
        if (!sp.getDescription().contains("[" + rn + "](" + rn.toLowerCase() + ".html)"))
            sp.setDescription(sp.getDescription() + "* [" + rn + "](" + rn.toLowerCase() + ".html): " + spd.getDescription() + "\r\n");
        // ext.addExtension("description", new MarkdownType(spd.getDescription()));
        if (!Utilities.noString(spd.getExpression()) && !sp.getExpression().contains(spd.getExpression()))
            sp.setExpression(sp.getExpression() + " | " + spd.getExpression());
        String xpath = new XPathQueryGenerator(this.definitions, null, null).generateXpath(spd.getPaths(), rn);
        if (xpath != null) {
            if (xpath.contains("[x]"))
                xpath = convertToXpath(xpath);
            if (sp.getXpath() != null && !sp.getXpath().contains(xpath))
                sp.setXpath(sp.getXpath() + " | " + xpath);
            if (sp.getXpathUsage() != spd.getxPathUsage())
                throw new FHIRException("Usage mismatch on common parameter: expected " + sp.getXpathUsage().toCode() + " but found " + spd.getxPathUsage().toCode());
        }
        boolean found = false;
        for (CodeType ct : sp.getBase()) found = found || p.getType().equals(ct.asStringValue());
        if (!found)
            sp.addBase(p.getType());
    }
    spd.setUrl(sp.getUrl());
    for (String target : spd.getWorkingTargets()) {
        if ("Any".equals(target) == true) {
            for (String resourceName : definitions.sortedResourceNames()) {
                boolean found = false;
                for (CodeType st : sp.getTarget()) found = found || st.asStringValue().equals(resourceName);
                if (!found)
                    sp.addTarget(resourceName);
            }
        } else {
            boolean found = false;
            for (CodeType st : sp.getTarget()) found = found || st.asStringValue().equals(target);
            if (!found)
                sp.addTarget(target);
        }
    }
    return sp;
}

Example 65 with ResourceDefn

use of org.hl7.fhir.definitions.model.ResourceDefn in project kindling by HL7.

the class FhirTurtleGenerator method genResourceDefn.

/**
 * Resource Definition generator
 *
 * @param rd Resource Definition to emit
 * @throws Exception
 */
private void genResourceDefn(ResourceDefn rd) throws Exception {
    String resourceName = rd.getName();
    ElementDefn resourceType = rd.getRoot();
    FHIRResource rdRes = fact.fhir_class(resourceName, resourceType.getTypes().isEmpty() ? OWL2.Thing : RDFNamespace.FHIR.resourceRef(resourceType.typeCode())).addDefinition(rd.getDefinition());
    processTypes(resourceName, rdRes, resourceType, resourceName, true);
    if (!Utilities.noString(resourceType.getW5()))
        rdRes.addObjectProperty(RDFS.subClassOf, RDFNamespace.W5.resourceRef(resourceType.getW5()));
}